Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 SNORA54-201ENST00000384281 123 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 ARF4P3-201ENST00000397387 509 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AC006028.1-201ENST00000438379 402 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 RPS4XP2-201ENST00000458402 793 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 RPS3AP43-201ENST00000479743 781 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AC093755.1-201ENST00000512950 1023 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AC103881.1-201ENST00000603476 538 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AC011266.1-201ENST00000624119 3569 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AL022322.2-201ENST00000624072 20397 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 AC093849.1-201ENST00000563631 2209 ntBASIC4.38□□□□□ -1.71
RGPD3A6NKT7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.38□□□□□ -1.71
RGPD3A6NKT7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 SNORD74.4-201ENST00000364129 80 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AL139281.1-201ENST00000422120 335 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AP000942.1-201ENST00000463969 747 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC007998.5-201ENST00000622938 237 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 MIR422A-201ENST00000362286 90 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 RPS24P12-201ENST00000402084 394 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 HLFP1-201ENST00000402375 499 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 BX119904.1-201ENST00000432026 348 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC069285.2-201ENST00000440210 275 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 RPL31P50-201ENST00000471002 296 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 RPS26P15-201ENST00000488067 348 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 RN7SKP209-201ENST00000516888 304 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 PSMA2P1-201ENST00000526365 646 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC011270.1-201ENST00000558606 583 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 TUG1_1.1-201ENST00000610654 145 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 AL669942.2-201ENST00000620352 697 ntBASIC4.37□□□□□ -1.71
RGPD3A6NKT7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.37□□□□□ -1.71
RGPD3A6NKT7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 SETP15-201ENST00000412724 337 ntBASIC4.36□□□□□ -1.71
RGPD3A6NKT7 DNAJC19P8-201ENST00000452887 259 ntBASIC4.36□□□□□ -1.71
RGPD3A6NKT7 AC026801.2-201ENST00000515352 425 ntBASIC4.36□□□□□ -1.71
RGPD3A6NKT7 EIF1P6-201ENST00000600054 334 ntBASIC4.36□□□□□ -1.71
RGPD3A6NKT7 AC128687.2-201ENST00000609657 566 ntBASIC4.36□□□□□ -1.71
RGPD3A6NKT7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 SAGE2P-201ENST00000420011 2126 ntBASIC4.36□□□□□ -1.71
RGPD3A6NKT7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RGPD3A6NKT7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC105272.1-201ENST00000438604 198 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 RN7SL594P-201ENST00000470590 287 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC068722.2-201ENST00000618734 544 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms