Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 UBE2V2P2-201ENST00000587677 504 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RPL12P25-202ENST00000598100 674 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 PHKBP1-201ENST00000450951 1951 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 Y_RNA.38-201ENST00000362617 102 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 RNA5SP123-201ENST00000363244 119 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 MT-TD-201ENST00000387419 68 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 RPL21P111-201ENST00000418453 477 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC012065.2-201ENST00000421295 375 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC099336.2-201ENST00000422457 254 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC006335.2-201ENST00000437993 330 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 USP9YP8-201ENST00000441913 500 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC005297.2-201ENST00000450430 606 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC099560.2-201ENST00000457554 255 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 RPL38P1-201ENST00000460914 211 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 PLGLA-201ENST00000465668 449 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 RN7SL591P-201ENST00000496150 292 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 MTCYBP18-201ENST00000501056 747 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 NPM1P41-201ENST00000512920 831 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC134698.5-201ENST00000519444 336 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC068993.1-201ENST00000546724 589 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 CBX3P5-201ENST00000552017 521 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 SETP2-201ENST00000553886 926 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 SUB1P2-201ENST00000556401 297 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC209154.1-201ENST00000582156 337 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 AC073091.2-201ENST00000603205 907 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 U1.25-201ENST00000614085 162 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 MIR3662-201ENST00000637030 95 ntBASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.65□□□□□ -1.34
TMEM88BA6NKF7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 ELL2P4-201ENST00000446870 1376 ntBASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.65□□□□□ -1.35
TMEM88BA6NKF7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 SALL4P7-201ENST00000555779 3120 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 Y_RNA.160-201ENST00000363677 92 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 RNA5SP87-201ENST00000384155 118 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 RPL31P52-201ENST00000407532 367 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 RN7SKP27-201ENST00000410684 333 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 OR51A5P-201ENST00000415429 942 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 RPL31P45-201ENST00000419532 356 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC105402.2-201ENST00000438503 358 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms