Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 RPS27P5-201ENST00000444247 244 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 RPL34P26-201ENST00000445636 354 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 CDY13P-201ENST00000445813 1015 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 CDY23P-201ENST00000451661 1014 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC005229.2-201ENST00000456995 399 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 SNORA59A-201ENST00000459326 152 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 RPL7P48-201ENST00000461513 746 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 RPS4XP15-201ENST00000489210 795 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 MTCO2P9-201ENST00000503214 694 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC026403.1-201ENST00000518938 295 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AL352979.3-201ENST00000553515 247 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 MIR4298-201ENST00000584380 73 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 VN1R92P-201ENST00000598511 928 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC110792.4-201ENST00000609843 298 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC067852.7-201ENST00000623270 535 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 MTND5P11-201ENST00000511037 1812 ntBASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.97□□□□□ -1.77
TRABD2BA6NFA1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRABD2BA6NFA1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
TRABD2BA6NFA1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.96□□□□□ -1.77
TRABD2BA6NFA1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
TRABD2BA6NFA1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 RNU1-15P-201ENST00000353977 144 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 MIR30B-201ENST00000384850 88 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 MIR634-201ENST00000385208 97 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AL512637.2-201ENST00000431287 1256 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 DDX39BP2-208ENST00000453923 258 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 RPL38P1-201ENST00000460914 211 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 CYCSP20-201ENST00000473154 315 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC092902.1-201ENST00000486999 259 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC010627.1-201ENST00000503819 1294 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC121161.1-201ENST00000510606 652 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 RNU1-95P-201ENST00000516357 160 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 RNU1-128P-201ENST00000516704 160 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 SULT1C2P2-201ENST00000562517 294 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC106734.1-201ENST00000568646 663 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC022884.3-201ENST00000579571 248 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AL592436.1-201ENST00000605135 558 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC023813.4-201ENST00000607580 580 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC016957.2-201ENST00000616998 848 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC006249.1-201ENST00000621223 471 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AL138960.2-201ENST00000625145 535 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 AC017007.4-201ENST00000503353 1352 ntBASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.96□□□□□ -1.78
TRABD2BA6NFA1 MFSD8-213ENST00000641134 1327 ntBASIC3.95□□□□□ -1.78
TRABD2BA6NFA1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
TRABD2BA6NFA1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRABD2BA6NFA1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.95□□□□□ -1.78
TRABD2BA6NFA1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms