Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC013442.1-201ENST00000397347 228 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC009302.1-201ENST00000417147 390 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC099336.2-201ENST00000422457 254 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AL049610.1-201ENST00000423374 372 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 EI24P4-201ENST00000423683 1078 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC093698.1-201ENST00000423843 571 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 COX6CP13-201ENST00000428703 226 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 VDAC1P6-201ENST00000430062 855 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 UBE2FP3-201ENST00000436366 524 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 TMX2P1-201ENST00000436507 708 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 MTND4P6-201ENST00000438297 472 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC099560.2-201ENST00000457554 255 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC010301.1-201ENST00000473936 355 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 RPL7AP10-201ENST00000481016 791 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC093267.1-201ENST00000489176 961 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC008897.1-201ENST00000494006 347 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC006499.5-201ENST00000505037 514 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 SNX5P1-201ENST00000505757 1041 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 ENPP7P11-201ENST00000505915 627 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AL671862.1-201ENST00000515851 349 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC090502.2-201ENST00000549267 280 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 RSL24D1P11-201ENST00000591045 491 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 U73023.1-201ENST00000603134 700 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC103591.3-201ENST00000608684 209 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AP000254.1-201ENST00000609934 520 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC091905.4-201ENST00000623432 202 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC005005.4-201ENST00000623789 16698 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 MTND5P24-201ENST00000438892 1767 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 AC011755.1-201ENST00000623763 2049 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 RNU4-21P-201ENST00000362802 126 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 U3.4-201ENST00000363352 213 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 RN7SKP113-201ENST00000363891 295 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AL035079.1-201ENST00000405210 287 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AL450338.1-201ENST00000407987 512 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 RNU6-648P-201ENST00000410190 107 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 RNU2-28P-201ENST00000410457 189 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 OR6C64P-201ENST00000419708 825 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AL031736.2-201ENST00000426573 787 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 PHKBP1-201ENST00000450951 1951 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 VN1R32P-201ENST00000452234 905 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 RNU6-956P-201ENST00000458868 103 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AC091180.1-201ENST00000462104 372 ntBASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB1Q9Y5F3 AC090013.1-201ENST00000485147 480 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms