Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 UBE2FP2-201ENST00000566646 462 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC012417.1-201ENST00000582307 1039 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 MIR4737-201ENST00000583979 81 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC091488.1-201ENST00000604239 660 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC005972.3-201ENST00000606304 481 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC004943.3-201ENST00000624116 600 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 MIR4302-201ENST00000638058 60 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 MFSD8-216ENST00000641147 4009 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC008033.1-201ENST00000216407 1162 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 MIR331-201ENST00000362302 94 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SKP103-201ENST00000363848 320 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RNU1-130P-201ENST00000363930 160 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SKP15-201ENST00000364742 309 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RNU6-356P-201ENST00000384140 107 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 PTMAP5-201ENST00000393073 333 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 ATP5F1P6-201ENST00000402768 767 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC069218.2-201ENST00000411665 344 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AL445183.3-201ENST00000414168 502 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC008173.1-201ENST00000418901 264 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 UQCRBP1-201ENST00000421129 336 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RPL7AP25-201ENST00000423357 805 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 MTATP6P11-201ENST00000428071 670 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 MTCO1P43-201ENST00000431831 488 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RPL29P29-201ENST00000448725 423 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RPL23AP15-201ENST00000450202 459 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RPL7P55-201ENST00000450522 746 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 BX276092.4-201ENST00000452056 248 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC146507.1-201ENST00000468335 354 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC092324.1-201ENST00000468671 324 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC078857.1-201ENST00000469870 667 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC078785.3-201ENST00000476607 425 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SL101P-201ENST00000496350 279 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 HPRT1P2-201ENST00000505250 544 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 TMEM248P1-201ENST00000510579 951 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC026726.1-201ENST00000512859 601 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC027338.1-201ENST00000514840 825 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AP003168.1-201ENST00000530091 307 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 CENPUP2-201ENST00000555897 1186 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC095057.3-201ENST00000567102 1157 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC007599.1-201ENST00000568688 1174 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC012146.2-201ENST00000576545 416 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AL354984.3-201ENST00000604803 325 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 VN1R9P-201ENST00000614184 867 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC090246.1-201ENST00000616499 426 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AL591424.2-201ENST00000617023 128 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC008013.2-202ENST00000637965 364 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC132825.7-201ENST00000638744 335 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
KCNIP3Q9Y2W7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 MTCO1P6-201ENST00000481192 1384 ntBASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.41□□□□□ -1.86
KCNIP3Q9Y2W7 MIR16-2-201ENST00000362117 81 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms