Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC084357.1-201ENST00000473404 255 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AC069499.1-201ENST00000489433 509 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 HNRNPKP5-201ENST00000515300 253 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 MIR4276-201ENST00000584832 70 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AC067852.3-201ENST00000589177 561 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 MIR486-1-201ENST00000612171 68 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 ZNF807-201ENST00000328088 1707 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SHANK2Q9UPX8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHANK2Q9UPX8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHANK2Q9UPX8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.21□□□□□ -1.57
SHANK2Q9UPX8 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
SHANK2Q9UPX8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 RNU6-283P-201ENST00000364788 107 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 BX842559.1-201ENST00000419615 532 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 HSPE1P27-201ENST00000430808 296 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AL356535.1-201ENST00000440335 398 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 MTND6P32-201ENST00000457611 483 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 HMGB3P14-201ENST00000494195 599 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AL121766.1-201ENST00000547436 487 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AL606834.2-201ENST00000602954 668 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AC074276.2-201ENST00000619891 348 ntBASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHANK2Q9UPX8 AC007656.2-201ENST00000624902 4547 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 RSL24D1P1-201ENST00000404972 493 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 RNA5SP80-201ENST00000410475 111 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 RPL5P16-201ENST00000471467 790 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 FCF1P8-201ENST00000510322 597 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC023141.12-201ENST00000512399 199 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC233280.2-201ENST00000603917 1070 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AL354976.1-201ENST00000613843 387 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AL121834.1-202ENST00000404494 277 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 NANOGP6-201ENST00000429190 847 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 ANP32BP2-201ENST00000454525 545 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 RPL27AP5-201ENST00000469428 449 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 MIR5680-201ENST00000577577 84 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 CKS1BP3-201ENST00000600888 237 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 AC073657.2-201ENST00000605661 303 ntBASIC5.2□□□□□ -1.58
SHANK2Q9UPX8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 AL022311.1-201ENST00000623726 19416 ntBASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 NMD3P1-201ENST00000439704 1488 ntBASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 AC068254.2-201ENST00000623938 3577 ntBASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 RNU1-18P-201ENST00000363062 164 ntBASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 RNA5SP39-201ENST00000411245 120 ntBASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.19□□□□□ -1.58
SHANK2Q9UPX8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHANK2Q9UPX8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.18□□□□□ -1.58
SHANK2Q9UPX8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHANK2Q9UPX8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms