Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 AL606490.9-201ENST00000603331 271 ntBASIC4.01□□□□□ -1.77
LHX3Q9UBR4 VN1R9P-201ENST00000614184 867 ntBASIC4.01□□□□□ -1.77
LHX3Q9UBR4 AL590396.2-201ENST00000636511 1041 ntBASIC4.01□□□□□ -1.77
LHX3Q9UBR4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 AC022893.2-201ENST00000564832 3296 ntBASIC4.01□□□□□ -1.77
LHX3Q9UBR4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 AC097504.1-201ENST00000515103 2415 ntBASIC4.01□□□□□ -1.77
LHX3Q9UBR4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LHX3Q9UBR4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4□□□□□ -1.77
LHX3Q9UBR4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 FAM91A3P-201ENST00000456826 2544 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 OR6K3-202ENST00000368146 996 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 RNU6-213P-201ENST00000384051 104 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC092017.2-201ENST00000427600 362 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 ELOCP8-201ENST00000439309 332 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC069285.2-201ENST00000440210 275 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 ELOCP15-201ENST00000442090 332 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 RPL7P31-201ENST00000450192 724 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 RPL32P14-201ENST00000463196 378 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AL672167.3-201ENST00000465951 960 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC020898.1-201ENST00000474167 787 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC104108.1-201ENST00000509930 412 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC026402.1-201ENST00000513642 170 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AP003717.3-201ENST00000544832 1180 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 HMGB3P26-201ENST00000560051 582 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4□□□□□ -1.77
LHX3Q9UBR4 MIR4286-201ENST00000580651 93 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC015911.5-201ENST00000587076 451 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 ABI1P1-201ENST00000603375 1120 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC069304.3-201ENST00000603938 1084 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC026741.1-201ENST00000605892 482 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC099676.1-201ENST00000608886 657 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC096586.1-201ENST00000610267 561 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC000123.2-201ENST00000623124 461 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 AC073530.2-201ENST00000623987 261 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4□□□□□ -1.77
LHX3Q9UBR4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 AC119744.1-201ENST00000454746 1715 ntBASIC4□□□□□ -1.77
LHX3Q9UBR4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX3Q9UBR4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AP002001.2-201ENST00000529025 1469 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC104446.1-201ENST00000613728 1321 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC016588.2-201ENST00000632484 3021 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 RNU1-87P-201ENST00000363727 170 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 HNRNPDP2-201ENST00000406475 478 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AL450992.3-201ENST00000413192 568 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 RPL7AP73-201ENST00000413490 353 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 Z97055.1-201ENST00000419730 712 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 OR5AW1P-201ENST00000426334 1006 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC092809.1-201ENST00000441469 474 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC096992.1-201ENST00000459808 709 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 RPL7AP28-201ENST00000464513 571 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 PPIAP15-201ENST00000479662 484 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 RPL7P24-201ENST00000493052 752 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 AC008494.2-201ENST00000514544 370 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 RNU6-352P-201ENST00000516908 107 ntBASIC3.99□□□□□ -1.77
LHX3Q9UBR4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX3Q9UBR4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms