Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CUEDC1Q9NWM3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 TCP11X1-202ENST00000622971 1372 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC105114.1-201ENST00000624795 1862 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 RN7SKP144-201ENST00000411108 279 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AL031736.2-201ENST00000426573 787 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 PRPF38AP2-201ENST00000438179 851 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC239809.1-201ENST00000450470 217 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC068781.1-201ENST00000488231 618 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 RPS4XP18-201ENST00000495480 763 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-202P-201ENST00000515998 96 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 RNY3P15-201ENST00000516297 97 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-410P-201ENST00000517006 107 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 RN7SL230P-201ENST00000580835 303 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC015818.6-201ENST00000584274 634 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC098848.2-201ENST00000588023 330 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC011891.2-201ENST00000604949 397 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC098479.1-201ENST00000609225 154 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AL352984.2-201ENST00000611153 546 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AL352984.2-202ENST00000613699 155 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 U1.25-201ENST00000614085 162 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 U2.1-201ENST00000618978 145 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AP001005.3-201ENST00000622049 129 ntBASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CUEDC1Q9NWM3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AP001284.1-201ENST00000528393 2118 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 STAG3L4-201ENST00000352103 530 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 MIR1-2-201ENST00000384961 85 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC016769.2-201ENST00000414815 475 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 RPL23AP30-201ENST00000432419 501 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC119618.1-201ENST00000434191 222 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 SNRPBP1-201ENST00000443634 282 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 MORF4-201ENST00000447135 971 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 RN7SL221P-201ENST00000466190 281 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC099340.1-201ENST00000475247 599 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 RPL21P99-201ENST00000480369 423 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC091965.3-201ENST00000506236 208 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 RNA5SP318-201ENST00000516352 92 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms