Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 OR10V3P-201ENST00000525712 725 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 OR5AK3P-201ENST00000527486 1297 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC091516.1-201ENST00000549191 703 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL360157.1-201ENST00000565962 87 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL390816.3-201ENST00000604527 1066 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL365400.2-201ENST00000605604 902 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AP003392.5-201ENST00000607857 415 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC073569.3-201ENST00000619055 682 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 METTL21EP-201ENST00000298105 713 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 RNU6-666P-201ENST00000363499 107 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 RNA5SP27-201ENST00000363839 119 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 RNU6-185P-201ENST00000384421 107 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AL445213.1-201ENST00000412589 747 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 SSR1P2-201ENST00000415208 787 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC108032.1-201ENST00000416706 207 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 OR6K4P-201ENST00000423179 955 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC096638.2-201ENST00000434965 711 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 CACYBPP1-201ENST00000438592 684 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AF228730.2-201ENST00000438784 848 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 RPL6P9-201ENST00000466502 859 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC107015.1-201ENST00000466902 747 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC068587.2-201ENST00000478386 781 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC026979.1-201ENST00000492525 396 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC113420.1-201ENST00000507903 571 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 RN7SKP287-201ENST00000516546 266 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC093424.1-201ENST00000604999 338 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC091167.4-201ENST00000605079 184 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 FRG1HP-204ENST00000617940 757 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 MIR6758-201ENST00000620653 63 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC009951.1-201ENST00000623674 2614 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 AC139713.2-210ENST00000641741 992 ntBASIC4.25□□□□□ -1.73
SIX2Q9NPC8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX2Q9NPC8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 SNORD65C-201ENST00000390962 71 ntBASIC4.24□□□□□ -1.73
SIX2Q9NPC8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX2Q9NPC8 RPL7P27-201ENST00000403775 720 ntBASIC4.24□□□□□ -1.73
SIX2Q9NPC8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.24□□□□□ -1.73
SIX2Q9NPC8 RNA5SP498-201ENST00000411342 120 ntBASIC4.24□□□□□ -1.73
SIX2Q9NPC8 AC092638.1-201ENST00000411966 1275 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms