Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC092634.6-201ENST00000418558 192 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC069213.2-201ENST00000420238 366 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC092017.2-201ENST00000427600 362 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 MTND1P20-201ENST00000430341 950 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 MED14P1-201ENST00000430517 648 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC016712.1-201ENST00000431088 378 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 RAB11AP1-201ENST00000442978 646 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 RPL21P133-201ENST00000443666 476 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AL691482.1-201ENST00000453255 87 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 RPS17P2-201ENST00000461663 408 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC006511.1-201ENST00000470614 315 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 SCARNA22-201ENST00000503991 125 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC093281.2-201ENST00000510153 597 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 SNORA48.10-201ENST00000516965 160 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 RNA5SP230-201ENST00000517039 122 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC106038.2-201ENST00000520706 568 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 SLC2A13P1-201ENST00000531560 322 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 MTCYBP13-201ENST00000578634 1093 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC146944.4-201ENST00000602697 718 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC018695.5-201ENST00000605872 315 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AL731566.2-201ENST00000618971 317 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC120349.2-201ENST00000625002 298 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC090017.1-201ENST00000548612 1779 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 RNU6-444P-201ENST00000383988 108 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 SNORD116-4-201ENST00000384733 96 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 U3.30-201ENST00000391308 210 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 PRRC2CP1-201ENST00000404428 159 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 RNU6-920P-201ENST00000410926 92 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC008280.1-201ENST00000418851 412 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 C4BPAP2-201ENST00000428434 478 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 OR2B7P-201ENST00000429302 934 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 THAP5P1-201ENST00000439089 262 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC000111.2-201ENST00000448200 210 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 RNA5SP216-201ENST00000516111 123 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AL512347.1-201ENST00000566420 503 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC104687.2-201ENST00000604442 342 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC010424.2-201ENST00000607594 443 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AL031667.3-201ENST00000620124 655 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC098679.5-201ENST00000624394 571 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC099063.3-201ENST00000642066 185 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AC104260.2-201ENST00000623551 3497 ntBASIC5.52□□□□□ -1.53
VTA1Q9NP79 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.52□□□□□ -1.53
VTA1Q9NP79 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTA1Q9NP79 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC010928.1-201ENST00000592477 1447 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 SNORA73.1-201ENST00000363107 205 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 RNU6-1122P-201ENST00000384449 107 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms