Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC026979.1-201ENST00000492525 396 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC091860.1-201ENST00000505723 432 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC119751.4-201ENST00000507498 357 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC119751.1-201ENST00000513357 765 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AF279873.1-201ENST00000523393 313 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 RPL23AP97-201ENST00000568955 471 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC083899.3-201ENST00000603413 594 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 LLPHP1-201ENST00000603571 367 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AL160290.3-201ENST00000604869 165 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC113194.1-201ENST00000606037 500 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AL445423.1-201ENST00000609941 536 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC105429.2-201ENST00000610567 517 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
UBQLN3Q9H347 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
UBQLN3Q9H347 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC007390.2-201ENST00000606229 3803 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC008033.1-201ENST00000216407 1162 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MIR3065-201ENST00000390137 79 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 BTF3P8-201ENST00000414577 526 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 COX6CP17-201ENST00000421389 185 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 RPS12P5-201ENST00000423449 371 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC011998.1-201ENST00000433403 117 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC114495.1-201ENST00000441274 436 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 TPT1P12-201ENST00000448968 492 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC012170.1-201ENST00000495139 359 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC093840.1-201ENST00000511599 336 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC104417.1-201ENST00000523974 751 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC118942.1-201ENST00000529674 1035 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC122134.1-202ENST00000569111 1201 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 BPTFP1-201ENST00000579209 492 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AP001542.2-201ENST00000593141 364 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC079587.1-201ENST00000603846 277 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 Z98200.1-201ENST00000607298 470 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AL121652.1-201ENST00000608851 448 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC093673.2-201ENST00000609674 331 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AL133243.3-201ENST00000617415 3004 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 MFSD8-242ENST00000641690 4199 ntBASIC4.03□□□□□ -1.76
UBQLN3Q9H347 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.03□□□□□ -1.76
UBQLN3Q9H347 AC111188.2-201ENST00000529697 1387 ntBASIC4.02□□□□□ -1.77
UBQLN3Q9H347 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBQLN3Q9H347 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBQLN3Q9H347 RPL32P3-201ENST00000359025 275 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms