Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM3Q9BZL3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.89□□□□□ -1.95
SMIM3Q9BZL3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM3Q9BZL3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM3Q9BZL3 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 SNORD56.3-201ENST00000363507 71 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 RNA5SP130-201ENST00000364431 114 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 RNA5SP505-201ENST00000364748 108 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 SNORA48.8-201ENST00000391324 134 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AP000567.1-201ENST00000406413 156 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 RNA5SP31-201ENST00000411144 127 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 RANP4-201ENST00000413361 655 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC126124.2-201ENST00000413542 321 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC017079.2-201ENST00000416102 485 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 DNAJC19P7-201ENST00000428811 344 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CNOT7P1-201ENST00000429006 852 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 TXNP2-201ENST00000443918 295 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 SETD6P1-201ENST00000444575 317 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AL357552.1-201ENST00000445254 415 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 PHBP14-201ENST00000512887 367 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC026333.2-201ENST00000542164 106 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 UBE2NP1-201ENST00000545592 458 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC010198.2-201ENST00000550612 259 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 DUXAP6-201ENST00000553858 601 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AP000919.1-202ENST00000581139 1264 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 RN7SL600P-201ENST00000581811 299 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC019131.2-201ENST00000609071 870 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC105429.2-201ENST00000610567 517 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC114781.5-201ENST00000615297 108 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AL732618.1-201ENST00000623251 301 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 AC092184.1-201ENST00000625042 715 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 MAPK10-362ENST00000641864 4484 ntBASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM3Q9BZL3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 SNORA51.1-201ENST00000363243 140 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 RNA5SP509-201ENST00000364577 119 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL035419.1-201ENST00000397037 564 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL513533.1-201ENST00000453728 415 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 SNORA70.19-201ENST00000516717 90 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC044860.2-201ENST00000561005 179 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC105036.1-201ENST00000566222 271 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC005191.1-201ENST00000603950 358 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC090425.2-201ENST00000608818 501 ntBASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.87□□□□□ -1.95
SMIM3Q9BZL3 AC100827.5-201ENST00000615883 426 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms