Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 GSTA8P-201ENST00000404253 637 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC017078.1-201ENST00000416146 368 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC096638.2-201ENST00000434965 711 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 TRBV12-2-201ENST00000489763 344 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 FRG1CP-201ENST00000358464 769 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 RPS12P5-201ENST00000423449 371 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC006445.1-201ENST00000491925 405 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC069306.1-201ENST00000507006 843 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.31□□□□□ -1.56
SCAPERQ9BY12 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.31□□□□□ -1.56
SCAPERQ9BY12 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AL645937.1-201ENST00000641739 1652 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AC119744.1-201ENST00000454746 1715 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 HLFP1-201ENST00000402375 499 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AC004552.1-201ENST00000419089 348 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 ATP5HP2-201ENST00000433885 485 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AC099563.1-201ENST00000456086 418 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 RPS26P3-201ENST00000470205 348 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AC090543.2-201ENST00000483963 348 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AC004057.1-201ENST00000485827 348 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.3□□□□□ -1.56
SCAPERQ9BY12 PTGES3P3-201ENST00000511479 482 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AL121766.1-201ENST00000547436 487 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 MIR4276-201ENST00000584832 70 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 MRPS35P3-201ENST00000603189 709 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 AL162274.2-201ENST00000614406 332 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.3□□□□□ -1.56
SCAPERQ9BY12 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 MTHFD2P2-201ENST00000407725 247 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 COTL1P1-201ENST00000422309 375 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 MTND2P11-201ENST00000423638 648 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 CCRL1P1-201ENST00000449542 1053 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC098824.1-201ENST00000453565 980 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 RN7SL429P-201ENST00000479090 223 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 RN7SL489P-201ENST00000486185 223 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 RN7SL327P-201ENST00000488659 223 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 RN7SL853P-201ENST00000617250 223 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC119674.1-212ENST00000641155 993 ntBASIC5.29□□□□□ -1.56
SCAPERQ9BY12 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCAPERQ9BY12 AC017007.4-201ENST00000503353 1352 ntBASIC5.28□□□□□ -1.56
SCAPERQ9BY12 SAGE2P-201ENST00000420011 2126 ntBASIC5.28□□□□□ -1.56
SCAPERQ9BY12 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 FGF7P3-201ENST00000454645 303 ntBASIC5.28□□□□□ -1.56
SCAPERQ9BY12 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 AC113192.3-201ENST00000529152 742 ntBASIC5.28□□□□□ -1.56
SCAPERQ9BY12 CR383656.14-201ENST00000551951 406 ntBASIC5.28□□□□□ -1.56
SCAPERQ9BY12 AC006504.3-201ENST00000586818 523 ntBASIC5.28□□□□□ -1.56
SCAPERQ9BY12 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms