Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SNRPFP2-201ENST00000440710 251 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.92□□□□□ -1.62
USP47Q96K76 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.92□□□□□ -1.62
USP47Q96K76 AL133477.1-201ENST00000457472 514 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.92□□□□□ -1.62
USP47Q96K76 AC025518.1-201ENST00000479856 347 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.92□□□□□ -1.62
USP47Q96K76 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.92□□□□□ -1.62
USP47Q96K76 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.92□□□□□ -1.62
USP47Q96K76 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.92□□□□□ -1.62
USP47Q96K76 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.92□□□□□ -1.62
USP47Q96K76 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.92□□□□□ -1.62
USP47Q96K76 GTF2IP8-201ENST00000560687 584 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 AC106782.4-201ENST00000568264 210 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.92□□□□□ -1.62
USP47Q96K76 AC005858.4-201ENST00000623191 700 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
USP47Q96K76 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 AC068647.1-201ENST00000489539 2265 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USP47Q96K76 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.91□□□□□ -1.62
USP47Q96K76 AC097713.2-201ENST00000430199 356 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 MTCO3P16-201ENST00000454456 754 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 MTCO3P20-201ENST00000454926 688 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 SEPT7P3-201ENST00000455017 621 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RPS4XP2-201ENST00000458402 793 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.91□□□□□ -1.62
USP47Q96K76 RN7SL809P-201ENST00000482040 297 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RPL32P34-201ENST00000486380 400 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AC026333.2-201ENST00000542164 106 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.91□□□□□ -1.62
USP47Q96K76 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.91□□□□□ -1.62
USP47Q96K76 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.91□□□□□ -1.62
USP47Q96K76 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 AC027287.1-201ENST00000553115 1453 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 RNA5SP296-201ENST00000410523 111 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AC096664.2-201ENST00000411843 406 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 OR4K6P-201ENST00000416478 897 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.91□□□□□ -1.62
USP47Q96K76 MRPS18BP2-201ENST00000434310 759 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RPS20P1-201ENST00000434853 354 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RPS15AP29-201ENST00000445539 400 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AC239798.3-201ENST00000454459 408 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.91□□□□□ -1.62
USP47Q96K76 AC023598.1-201ENST00000472521 361 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RPS29P2-201ENST00000479278 136 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RPL23AP73-201ENST00000492507 471 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.91□□□□□ -1.62
USP47Q96K76 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP47Q96K76 AC119751.5-201ENST00000514077 770 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 RN7SKP57-201ENST00000517248 293 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AP000926.4-201ENST00000527351 454 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.91□□□□□ -1.62
USP47Q96K76 DUXAP6-201ENST00000553858 601 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AC005476.1-201ENST00000554427 397 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.91□□□□□ -1.62
USP47Q96K76 VN1R81P-201ENST00000602085 372 ntBASIC4.91□□□□□ -1.62
USP47Q96K76 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.91□□□□□ -1.62
USP47Q96K76 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.91□□□□□ -1.62
USP47Q96K76 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.91□□□□□ -1.62
USP47Q96K76 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
USP47Q96K76 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
USP47Q96K76 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.9□□□□□ -1.62
USP47Q96K76 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
USP47Q96K76 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.9□□□□□ -1.63
USP47Q96K76 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.9□□□□□ -1.63
USP47Q96K76 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.9□□□□□ -1.63
USP47Q96K76 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USP47Q96K76 RNA5SP197-201ENST00000363357 119 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 RNA5SP50-201ENST00000363731 107 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.9□□□□□ -1.63
USP47Q96K76 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.9□□□□□ -1.63
USP47Q96K76 RPS4XP10-201ENST00000465034 731 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 AC098583.1-201ENST00000480875 255 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 RPS6P4-201ENST00000494693 758 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 FCF1P3-201ENST00000496394 590 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.9□□□□□ -1.63
USP47Q96K76 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.9□□□□□ -1.63
USP47Q96K76 AC008126.1-201ENST00000549019 480 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 AL354950.1-201ENST00000614150 568 ntBASIC4.9□□□□□ -1.63
USP47Q96K76 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.9□□□□□ -1.63
USP47Q96K76 CUL4AP1-201ENST00000514750 1863 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 MAPK10-373ENST00000641983 6772 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms