Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC135507.1-201ENST00000607214 561 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AL158196.1-201ENST00000616786 434 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AF246928.1-201ENST00000623768 87 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AP001784.1-201ENST00000624107 428 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AP003072.4-201ENST00000624580 310 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC116563.2-201ENST00000624751 535 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 AC139713.2-215ENST00000641428 5037 ntBASIC4.83□□□□□ -1.64
VPS50Q96JG6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS50Q96JG6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS50Q96JG6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC005539.1-201ENST00000443768 1479 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AL390862.1-201ENST00000635467 1469 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 INTS6P1-201ENST00000504674 2530 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 RN7SKP104-201ENST00000362605 328 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 SNORD116-23-201ENST00000384645 92 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 Y_RNA.560-201ENST00000384689 102 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 LAP3P1-201ENST00000403648 294 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AL133264.1-201ENST00000407157 562 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 RPL23AP47-201ENST00000408017 460 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 RPL37P18-201ENST00000411602 243 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC234782.4-201ENST00000417646 1048 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 FABP7P2-201ENST00000429946 379 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC009238.2-201ENST00000431026 355 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 PPIAP17-201ENST00000438507 471 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 RPL7AP61-201ENST00000443410 636 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AL354714.3-201ENST00000447284 493 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 MTND1P29-201ENST00000448112 647 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC092647.2-201ENST00000452998 253 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 RPL31P3-201ENST00000458430 332 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 GYG1P1-201ENST00000460864 698 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 RN7SL443P-201ENST00000464331 290 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 MTND1P16-201ENST00000465177 898 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 RAP1BP2-201ENST00000478270 544 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 ACTG1P13-201ENST00000486987 1043 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC084757.1-201ENST00000559987 490 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 ISCA1P3-201ENST00000577104 373 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC008814.1-201ENST00000603797 406 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC133644.2-201ENST00000608142 540 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC004223.4-201ENST00000612426 332 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC243654.2-201ENST00000612843 443 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC011939.3-201ENST00000613686 466 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.82□□□□□ -1.64
VPS50Q96JG6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS50Q96JG6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS50Q96JG6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS50Q96JG6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VPS50Q96JG6 AL118496.1-201ENST00000440201 1812 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms