Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 RNU6-374P-201ENST00000364146 108 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC073264.1-201ENST00000411508 416 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC004022.2-201ENST00000413824 193 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 MTCYBP38-201ENST00000417160 1123 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 TMBIM7P-201ENST00000418074 855 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 NIPA2P1-201ENST00000426223 976 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 B3GNT2P1-201ENST00000434960 952 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 UBE2FP3-201ENST00000436366 524 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC092013.1-201ENST00000438795 332 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 CDC27P1-201ENST00000445384 715 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 SLC31A1P1-201ENST00000451221 567 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 USP9YP10-201ENST00000454868 628 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 CFTRP1-201ENST00000456646 183 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 RPS15AP1-201ENST00000457423 391 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC006511.1-201ENST00000470614 315 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 RN7SL591P-201ENST00000496150 292 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 MRPS33P2-201ENST00000507850 322 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 USP9YP5-201ENST00000511770 630 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AP000676.2-201ENST00000529711 301 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC008687.2-201ENST00000597865 520 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC079089.3-201ENST00000603094 673 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AL596327.1-201ENST00000603629 213 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC068276.1-201ENST00000605793 379 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 MTND4P4-201ENST00000439033 1366 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 AC021242.1-201ENST00000507315 2035 ntBASIC4.62□□□□□ -1.67
CTHRC1Q96CG8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 SCARNA15-201ENST00000607520 4325 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC090017.1-201ENST00000548612 1779 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RNU4-91P-201ENST00000364778 135 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPL23AP29-201ENST00000397284 453 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL645733.1-201ENST00000402250 217 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 PRELID3BP11-201ENST00000414230 479 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPL6P29-201ENST00000414863 865 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AF186996.5-201ENST00000418098 904 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RBMY2KP-201ENST00000418221 992 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPS27P18-201ENST00000431701 247 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC010881.1-201ENST00000433830 235 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPL7P11-201ENST00000437586 658 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPL12P3-201ENST00000440080 396 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPL26P28-201ENST00000451325 435 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 SNRPGP9-201ENST00000456025 225 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RN7SL319P-201ENST00000480656 221 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms