Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AL606834.3-201ENST00000602615 496 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC008536.1-201ENST00000602872 669 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AL031320.1-201ENST00000604177 357 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 HSPE1P14-201ENST00000605812 302 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 SNORA11.6-201ENST00000619030 128 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC090506.2-201ENST00000624521 419 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AL049536.1-201ENST00000625043 744 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC087821.2-201ENST00000637086 450 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC010928.1-201ENST00000592477 1447 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 MTCO1P14-201ENST00000441695 1559 ntBASIC4.26□□□□□ -1.73
VPS33AQ96AX1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS33AQ96AX1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC117529.2-201ENST00000512159 2068 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 RNU6-582P-201ENST00000362989 107 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 RNU1-85P-201ENST00000364127 164 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 SNORA71.2-201ENST00000364941 134 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MIR620-201ENST00000385232 95 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MIR513A2-201ENST00000385249 127 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MIR1178-201ENST00000408396 91 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 RN7SKP177-201ENST00000410567 355 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 BX510359.2-201ENST00000417920 305 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 HLA-N-201ENST00000437516 135 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 RPL23AP93-201ENST00000440847 484 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 NDUFA5P7-201ENST00000452914 242 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 FCF1P6-201ENST00000456841 595 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 RPL7P16-201ENST00000479738 738 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC108145.1-201ENST00000503770 153 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 DEFB130C-202ENST00000530001 230 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 YWHAZP1-201ENST00000556286 722 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC005255.1-201ENST00000593748 216 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL512782.1-201ENST00000603093 364 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AP003973.1-201ENST00000604639 691 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL583856.2-201ENST00000606298 543 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL592148.2-201ENST00000612210 372 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 MIR4727-201ENST00000622232 55 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AC098679.5-201ENST00000624394 571 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL512506.2-201ENST00000624472 458 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS33AQ96AX1 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
VPS33AQ96AX1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 SEPT7P7-201ENST00000420492 1301 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 MIR217-201ENST00000384817 110 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AL109941.1-201ENST00000401925 229 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms