Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RNU6-621P-201ENST00000364752 109 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RNU4-25P-201ENST00000410569 230 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RNU2-22P-201ENST00000411266 212 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TPMTP3-201ENST00000411928 735 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC007899.1-201ENST00000412776 775 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 COX6CP13-201ENST00000428703 226 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 OR2B8P-201ENST00000432841 938 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TRIM60P18-201ENST00000441518 828 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RPS26P30-201ENST00000443431 335 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 USP9YP29-201ENST00000445112 563 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 PSMC1P13-201ENST00000458195 985 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC096751.1-202ENST00000502691 1067 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC008549.1-201ENST00000512900 643 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RNA5SP464-201ENST00000516251 108 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RNU6-1004P-201ENST00000516584 111 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RNU6-405P-201ENST00000516637 110 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AP001317.1-201ENST00000531194 960 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 OR6C7P-201ENST00000547875 934 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AP005119.2-201ENST00000579735 1105 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AP000403.1-201ENST00000603349 851 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC005191.1-201ENST00000603950 358 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 OR8G7P-201ENST00000616658 848 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC019206.1-201ENST00000621938 425 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC116618.1-201ENST00000634617 774 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 MTND4P31-201ENST00000425607 1343 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC005539.1-201ENST00000443768 1479 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RNU4-31P-201ENST00000384211 141 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RNY3P14-201ENST00000384309 102 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RNA5SP105-201ENST00000391123 113 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 U3.30-201ENST00000391308 210 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 ZNF603P-201ENST00000405613 487 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AP000357.1-201ENST00000409926 1165 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 TBCAP2-201ENST00000416175 326 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 PTP4A1P1-201ENST00000420539 515 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 GTF2IP23-201ENST00000423746 351 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RPL12P34-201ENST00000424532 479 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 MED14P1-201ENST00000430517 648 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 HMGB1P45-201ENST00000435986 653 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 MTCO2P25-201ENST00000447065 681 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC239367.2-201ENST00000447309 705 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 MTND6P5-201ENST00000448266 512 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC091180.1-201ENST00000462104 372 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC037198.2-201ENST00000478845 733 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RPL23AP37-201ENST00000479658 549 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RN7SL441P-201ENST00000492388 296 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RPL37P25-201ENST00000507308 276 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC109445.1-201ENST00000512356 383 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms