Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 HSPE1P8-201ENST00000406997 288 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 MTND4P22-201ENST00000413116 1169 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 IFNNP1-201ENST00000429219 553 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 RPS3AP14-201ENST00000483907 780 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AC098799.1-201ENST00000504752 800 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 OR1AB1P-201ENST00000585564 761 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AC020914.4-201ENST00000597690 277 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AC084036.1-201ENST00000609190 508 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AC135507.2-201ENST00000612443 309 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 AC022149.2-201ENST00000621061 203 ntBASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC141Q6ZP82 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 RPL7P44-201ENST00000424827 742 ntBASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 MTCO1P45-201ENST00000431457 267 ntBASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 RPL27AP5-201ENST00000469428 449 ntBASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 RPL7P23-201ENST00000493874 747 ntBASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 MIMT1-201ENST00000597105 1050 ntBASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC141Q6ZP82 AC018555.1-201ENST00000567548 1980 ntBASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 YWHAEP5-201ENST00000431545 765 ntBASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AC005798.1-201ENST00000513715 387 ntBASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 DUXAP6-201ENST00000553858 601 ntBASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AC006539.2-201ENST00000601729 572 ntBASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 AL158062.1-201ENST00000619632 745 ntBASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC141Q6ZP82 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC141Q6ZP82 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC141Q6ZP82 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC141Q6ZP82 AL136131.1-201ENST00000406079 803 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 Z99755.1-201ENST00000414048 380 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 AL353705.1-201ENST00000433468 480 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 ATP5C1P1-201ENST00000441945 895 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 AC097462.2-201ENST00000504623 481 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 OR4R3P-201ENST00000525084 838 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 OR6C71P-202ENST00000641886 1107 ntBASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC141Q6ZP82 OR10J6P-201ENST00000289731 930 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC006989.1-201ENST00000427212 131 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC074367.1-201ENST00000438685 1125 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 NANOGNBP1-201ENST00000448444 480 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC080014.1-201ENST00000496877 1201 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC020893.1-201ENST00000502452 580 ntBASIC5.07□□□□□ -1.6
CCDC141Q6ZP82 AC023141.12-201ENST00000512399 199 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms