Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 PRELID3BP4-201ENST00000515476 571 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 SNORD116-26-201ENST00000516006 96 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AC139103.1-201ENST00000534696 1030 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 MIR5685-201ENST00000579080 79 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AL590396.4-201ENST00000636779 956 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AC013437.2-201ENST00000639587 677 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AL049555.1-201ENST00000562834 1933 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 NEAT1-202ENST00000501122 22743 ntBASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LYSMD4Q5XG99 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 NSRP1P1-201ENST00000444067 1693 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 OR11H4-201ENST00000315409 1082 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 RNU1-20P-201ENST00000363314 162 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 RNU1-83P-201ENST00000363426 164 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL592291.1-201ENST00000403830 352 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL031736.2-201ENST00000426573 787 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 MTCYBP32-201ENST00000427945 1084 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL050341.1-201ENST00000447743 313 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC104164.3-201ENST00000467363 1258 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 RPL7L1P8-201ENST00000469911 741 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 RPL30P11-201ENST00000495304 339 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 SETP1-201ENST00000556014 845 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 HSPE1P5-201ENST00000561489 272 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL049838.1-201ENST00000563647 981 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AP005262.1-201ENST00000582646 997 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 MIR3936-201ENST00000584304 110 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL160290.3-201ENST00000604869 165 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 BNIP3P4-201ENST00000604946 565 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL008729.2-201ENST00000606393 473 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 Z98200.1-201ENST00000607298 470 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC013468.1-201ENST00000608680 598 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 CR392039.5-201ENST00000623201 510 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC004777.1-201ENST00000624317 287 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC092608.3-201ENST00000625017 386 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC119744.1-201ENST00000454746 1715 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 CASC19-204ENST00000641001 2055 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AL627171.1-201ENST00000618845 1308 ntBASIC4.2□□□□□ -1.74
LYSMD4Q5XG99 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AC022031.1-201ENST00000585985 2593 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 MTCO1P6-201ENST00000481192 1384 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 SNORA71.3-201ENST00000362582 128 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 RNA5SP307-201ENST00000362863 116 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL603865.2-201ENST00000401679 213 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AC092638.1-201ENST00000411966 1275 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 MTCO1P54-201ENST00000430139 712 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL445584.1-201ENST00000431451 330 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL035246.1-201ENST00000433554 1255 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AC002542.1-201ENST00000440683 193 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 GTF3AP5-201ENST00000442645 697 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL929288.2-201ENST00000446368 407 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL133547.1-201ENST00000448546 220 ntBASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.19□□□□□ -1.74
LYSMD4Q5XG99 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms