Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 MAPK10-270ENST00000641102 3538 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 TAB3P1-202ENST00000452645 1634 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 LINC00561-201ENST00000565815 2738 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AL355377.1-201ENST00000621125 1653 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RNU6-379P-201ENST00000363813 104 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RN7SKP125-201ENST00000410481 302 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC017078.1-201ENST00000416146 368 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC007562.1-201ENST00000421819 517 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 NIPA2P1-201ENST00000426223 976 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 HSPE1P16-201ENST00000426640 348 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RPEP2-201ENST00000432149 701 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RPS24P13-201ENST00000442520 397 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC019185.1-201ENST00000442718 389 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RPL32P28-201ENST00000443577 397 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC073610.1-201ENST00000489971 396 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 SMURF2P1-201ENST00000514992 481 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 COPS8P3-201ENST00000526024 482 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AP001180.3-201ENST00000582221 145 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 RPSAP73-201ENST00000614820 330 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC132068.1-201ENST00000623805 459 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC231657.1-201ENST00000624313 397 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.36□□□□□ -1.23
RC3H1Q5TC82 AC087516.1-201ENST00000561236 2428 ntBASIC7.36□□□□□ -1.23
RC3H1Q5TC82 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 MAPK10-365ENST00000641902 3825 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 ASNSP1-204ENST00000641977 1664 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RNA5SP333-201ENST00000363466 118 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RNA5SP507-201ENST00000363603 121 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RNA5SP334-201ENST00000364825 118 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RNU6-209P-201ENST00000384118 107 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RNU6-452P-201ENST00000384406 107 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 MIR585-201ENST00000384887 94 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RPL7L1P9-201ENST00000431298 745 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AL137792.2-201ENST00000443484 235 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC068587.1-201ENST00000483613 781 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC074255.1-201ENST00000511259 501 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 RNU6-583P-201ENST00000516012 92 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC104986.1-201ENST00000517978 436 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC126615.2-201ENST00000553003 515 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AL049779.2-201ENST00000553847 315 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 TPMTP1-201ENST00000592307 737 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 AC090510.2-201ENST00000617465 629 ntBASIC7.35□□□□□ -1.23
RC3H1Q5TC82 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
RC3H1Q5TC82 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms