Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 RPS29P33-201ENST00000456717 146 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 RN7SL354P-201ENST00000469282 294 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AL136126.1-201ENST00000473603 402 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 RPL23AP44-201ENST00000482216 473 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 RPL36AP41-201ENST00000493820 306 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.82□□□□□ -1.64
ALFQ53S48 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 HMGB3P16-201ENST00000508037 287 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 MTCO1P30-201ENST00000515244 580 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 RNA5SP497-201ENST00000516081 97 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.82□□□□□ -1.64
ALFQ53S48 AC087808.1-201ENST00000520501 361 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 AC107954.1-201ENST00000565906 727 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 RN7SL690P-201ENST00000582087 240 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AL035411.2-201ENST00000604022 421 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 IGHV3-29-201ENST00000604817 344 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 HMGN2P28-201ENST00000606102 262 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 AL157392.4-201ENST00000609756 345 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC024257.5-201ENST00000612739 531 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC090116.1-201ENST00000615679 446 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 C2orf27A-204ENST00000623058 969 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALFQ53S48 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ALFQ53S48 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALFQ53S48 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 ZFRP1-201ENST00000457579 2970 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ALFQ53S48 MTND4P10-201ENST00000446199 1363 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ALFQ53S48 AC090337.1-201ENST00000579651 2074 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ALFQ53S48 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
ALFQ53S48 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALFQ53S48 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ALFQ53S48 RNA5SP505-201ENST00000364748 108 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 Y_RNA.472-201ENST00000384322 102 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AL121972.1-201ENST00000402023 252 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 RN7SKP267-201ENST00000410381 285 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 RPL26P29-201ENST00000415623 438 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.81□□□□□ -1.64
ALFQ53S48 AL035410.1-201ENST00000427409 427 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.81□□□□□ -1.64
ALFQ53S48 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.81□□□□□ -1.64
ALFQ53S48 RPS20P32-201ENST00000456044 356 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC108734.3-201ENST00000481241 1165 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 RPS23P1-201ENST00000491662 432 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 RPL23AP72-201ENST00000492447 435 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.81□□□□□ -1.64
ALFQ53S48 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.81□□□□□ -1.64
ALFQ53S48 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 CDH12P4-201ENST00000517835 295 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 CDH12P3-201ENST00000517935 295 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 CDH12P1-201ENST00000518435 295 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.81□□□□□ -1.64
ALFQ53S48 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.81□□□□□ -1.64
ALFQ53S48 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.81□□□□□ -1.64
ALFQ53S48 OR4A12P-201ENST00000530847 918 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AP003385.6-201ENST00000531603 374 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.81□□□□□ -1.64
ALFQ53S48 AC090502.2-201ENST00000549267 280 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC008127.2-201ENST00000549925 1075 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.81□□□□□ -1.64
ALFQ53S48 AC090616.5-202ENST00000582111 297 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.81□□□□□ -1.64
ALFQ53S48 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ALFQ53S48 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.81□□□□□ -1.64
ALFQ53S48 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.81□□□□□ -1.64
ALFQ53S48 AC119501.1-201ENST00000603646 475 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AL160237.3-201ENST00000604114 1013 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AL159169.3-201ENST00000608871 561 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 uc_338.18-201ENST00000615451 175 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC006213.4-201ENST00000616184 634 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC022106.2-201ENST00000620114 757 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.81□□□□□ -1.64
ALFQ53S48 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALFQ53S48 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALFQ53S48 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
ALFQ53S48 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
ALFQ53S48 MAPK10-263ENST00000641052 4307 ntBASIC4.81□□□□□ -1.64
ALFQ53S48 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.8□□□□□ -1.64
ALFQ53S48 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
ALFQ53S48 ZNF37BP-203ENST00000452306 1352 ntBASIC4.8□□□□□ -1.64
ALFQ53S48 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ALFQ53S48 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ALFQ53S48 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ALFQ53S48 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
ALFQ53S48 RNU6-398P-201ENST00000384143 109 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms