Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RFX7Q2KHR2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RFX7Q2KHR2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX7Q2KHR2 MTND5P23-201ENST00000430812 1655 ntBASIC4.33□□□□□ -1.72
RFX7Q2KHR2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.33□□□□□ -1.72
RFX7Q2KHR2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.32□□□□□ -1.72
RFX7Q2KHR2 AL162388.1-201ENST00000450912 352 ntBASIC4.32□□□□□ -1.72
RFX7Q2KHR2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.32□□□□□ -1.72
RFX7Q2KHR2 CYP2C60P-201ENST00000566088 139 ntBASIC4.32□□□□□ -1.72
RFX7Q2KHR2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 AC243756.2-201ENST00000618406 463 ntBASIC4.32□□□□□ -1.72
RFX7Q2KHR2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.32□□□□□ -1.72
RFX7Q2KHR2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX7Q2KHR2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AL391417.1-201ENST00000404100 426 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC097713.2-201ENST00000430199 356 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 MRPS18BP2-201ENST00000434310 759 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC073063.1-201ENST00000434352 607 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC074367.1-201ENST00000438685 1125 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 RPS4XP2-201ENST00000458402 793 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 CCDC75P1-201ENST00000469247 791 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC084357.1-201ENST00000473404 255 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 RNU6-964P-201ENST00000516524 69 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 DUX4L52-201ENST00000549363 777 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX7Q2KHR2 VN1R92P-201ENST00000598511 928 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 ELOCP35-201ENST00000604289 336 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC006077.1-201ENST00000604746 343 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 OR2BH1P-201ENST00000608850 864 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC022149.2-201ENST00000621061 203 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 AC012020.1-201ENST00000624541 1728 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 MTND5P1-201ENST00000445440 1375 ntBASIC4.31□□□□□ -1.72
RFX7Q2KHR2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC234772.1-201ENST00000377927 937 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC017079.2-201ENST00000416102 485 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC115115.1-201ENST00000449927 248 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC023598.1-201ENST00000472521 361 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 ACTG1P13-201ENST00000486987 1043 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 RPS3AP50-201ENST00000487064 803 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC090281.1-201ENST00000523019 276 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC011471.1-201ENST00000585766 187 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AL355596.1-201ENST00000565399 3996 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
RFX7Q2KHR2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 OR52E6-202ENST00000379946 954 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 RPL23AP48-201ENST00000406913 488 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 RN7SKP111-201ENST00000410349 271 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 Z92545.1-201ENST00000411782 234 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 SNORA59A-201ENST00000459326 152 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 RN7SL601P-201ENST00000471221 293 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 VWA8P1-201ENST00000510889 176 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms