Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH1Q08174 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDH1Q08174 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PCDH1Q08174 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 OR4G1P-203ENST00000641984 1631 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PCDH1Q08174 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 RN7SKP6-201ENST00000364795 319 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDH1Q08174 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PCDH1Q08174 RN7SKP144-201ENST00000411108 279 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 RPL26P29-201ENST00000415623 438 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 THEM7P-201ENST00000419556 672 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 RPL24P2-201ENST00000421023 475 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC007283.2-201ENST00000424739 197 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH1Q08174 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC104651.2-201ENST00000447549 528 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 SLC25A18P1-201ENST00000449385 454 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH1Q08174 RPL29P23-201ENST00000486188 442 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AC011005.3-201ENST00000491624 395 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 NPM1P41-201ENST00000512920 831 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 ZNF519P4-201ENST00000514008 125 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 Y_RNA.691-201ENST00000516611 103 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 CYCSP28-201ENST00000534284 321 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AL352979.3-201ENST00000553515 247 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 SCOCP1-201ENST00000554676 349 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 HMGN2P47-201ENST00000559378 272 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 RN7SL230P-201ENST00000580835 303 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 MIR4742-201ENST00000581069 85 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC008638.3-201ENST00000603341 463 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 HSPE1P14-201ENST00000605812 302 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AL391813.2-201ENST00000609113 322 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AC104237.2-201ENST00000612456 443 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC096861.1-201ENST00000616652 240 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 AC090971.5-201ENST00000621102 293 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH1Q08174 AP000550.3-201ENST00000637734 379 ntBASIC5.9□□□□□ -1.46
PCDH1Q08174 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH1Q08174 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PCDH1Q08174 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.9□□□□□ -1.47
PCDH1Q08174 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH1Q08174 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PCDH1Q08174 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH1Q08174 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
PCDH1Q08174 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.9□□□□□ -1.47
PCDH1Q08174 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH1Q08174 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC015799.1-201ENST00000622996 3122 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDH1Q08174 SNORD1C-201ENST00000363315 78 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PCDH1Q08174 MIR188-201ENST00000385034 86 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AL591416.1-201ENST00000404015 867 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 MIR548P-201ENST00000408336 84 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 HMGB1P18-201ENST00000438801 619 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 Z80107.2-201ENST00000445127 392 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AC006480.1-201ENST00000449887 378 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AL162739.1-201ENST00000450606 307 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms