Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SNORA73.2-201ENST00000364946 201 ntBASIC3.23□□□□□ -1.89
UBA52P62987 MIR30B-201ENST00000384850 88 ntBASIC3.23□□□□□ -1.89
UBA52P62987 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.23□□□□□ -1.89
UBA52P62987 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.23□□□□□ -1.89
UBA52P62987 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBA52P62987 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.23□□□□□ -1.89
UBA52P62987 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
UBA52P62987 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.23□□□□□ -1.89
UBA52P62987 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AL049610.1-201ENST00000423374 372 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.23□□□□□ -1.89
UBA52P62987 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UBA52P62987 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.23□□□□□ -1.89
UBA52P62987 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC092691.2-201ENST00000461787 803 ntBASIC3.23□□□□□ -1.89
UBA52P62987 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.23□□□□□ -1.89
UBA52P62987 NDUFB4P9-201ENST00000511646 388 ntBASIC3.23□□□□□ -1.89
UBA52P62987 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.23□□□□□ -1.89
UBA52P62987 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.23□□□□□ -1.89
UBA52P62987 AC008489.1-201ENST00000524271 483 ntBASIC3.23□□□□□ -1.89
UBA52P62987 OR4C2P-201ENST00000530855 1064 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.23□□□□□ -1.89
UBA52P62987 AC025627.2-201ENST00000576220 160 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC114878.2-201ENST00000604863 1251 ntBASIC3.23□□□□□ -1.89
UBA52P62987 AC019176.2-201ENST00000611579 315 ntBASIC3.23□□□□□ -1.89
UBA52P62987 ATE1-AS1-202ENST00000636460 506 ntBASIC3.23□□□□□ -1.89
UBA52P62987 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
UBA52P62987 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.23□□□□□ -1.89
UBA52P62987 AC063923.1-201ENST00000478982 1619 ntBASIC3.22□□□□□ -1.89
UBA52P62987 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 RAD1P1-201ENST00000231383 813 ntBASIC3.22□□□□□ -1.89
UBA52P62987 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 RNU6-328P-201ENST00000390887 106 ntBASIC3.22□□□□□ -1.89
UBA52P62987 RPS3AP25-201ENST00000411660 793 ntBASIC3.22□□□□□ -1.89
UBA52P62987 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.22□□□□□ -1.89
UBA52P62987 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 TBCAP1-201ENST00000436520 327 ntBASIC3.22□□□□□ -1.89
UBA52P62987 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.22□□□□□ -1.89
UBA52P62987 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 RPS17P13-201ENST00000448974 407 ntBASIC3.22□□□□□ -1.89
UBA52P62987 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
UBA52P62987 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
UBA52P62987 RPL23AP44-201ENST00000482216 473 ntBASIC3.22□□□□□ -1.89
UBA52P62987 RN7SL323P-201ENST00000494712 295 ntBASIC3.22□□□□□ -1.89
UBA52P62987 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
UBA52P62987 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 AC026403.1-201ENST00000518938 295 ntBASIC3.22□□□□□ -1.89
UBA52P62987 SUMO2P20-201ENST00000520803 283 ntBASIC3.22□□□□□ -1.89
UBA52P62987 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
UBA52P62987 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 AC008011.1-201ENST00000545989 227 ntBASIC3.22□□□□□ -1.89
UBA52P62987 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.22□□□□□ -1.89
UBA52P62987 AC091516.1-201ENST00000549191 703 ntBASIC3.22□□□□□ -1.89
UBA52P62987 DUX4L52-201ENST00000549363 777 ntBASIC3.22□□□□□ -1.89
UBA52P62987 AC090877.1-201ENST00000561418 344 ntBASIC3.22□□□□□ -1.89
UBA52P62987 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.22□□□□□ -1.89
UBA52P62987 AC017100.2-201ENST00000584628 355 ntBASIC3.22□□□□□ -1.89
UBA52P62987 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 AC018816.2-201ENST00000621460 353 ntBASIC3.22□□□□□ -1.89
UBA52P62987 FP236240.3-201ENST00000623061 327 ntBASIC3.22□□□□□ -1.89
UBA52P62987 AC009093.8-201ENST00000641769 292 ntBASIC3.22□□□□□ -1.89
UBA52P62987 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.22□□□□□ -1.89
UBA52P62987 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.22□□□□□ -1.89
UBA52P62987 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBA52P62987 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.22□□□□□ -1.89
UBA52P62987 PHKBP1-201ENST00000450951 1951 ntBASIC3.21□□□□□ -1.89
UBA52P62987 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
UBA52P62987 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
UBA52P62987 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.21□□□□□ -1.89
UBA52P62987 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.21□□□□□ -1.9
UBA52P62987 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBA52P62987 ZNF285B-201ENST00000561698 1767 ntBASIC3.21□□□□□ -1.9
UBA52P62987 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBA52P62987 U1.1-201ENST00000384101 164 ntBASIC3.21□□□□□ -1.9
UBA52P62987 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UBA52P62987 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.21□□□□□ -1.9
UBA52P62987 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.21□□□□□ -1.9
UBA52P62987 AC104849.1-201ENST00000462623 405 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AL049830.2-201ENST00000480072 201 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms