Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.24□□□□□ -1.73
PEX3P56589 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.24□□□□□ -1.73
PEX3P56589 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.24□□□□□ -1.73
PEX3P56589 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 HNRNPKP5-201ENST00000515300 253 ntBASIC4.24□□□□□ -1.73
PEX3P56589 RN7SKP141-201ENST00000516167 338 ntBASIC4.24□□□□□ -1.73
PEX3P56589 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.24□□□□□ -1.73
PEX3P56589 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.24□□□□□ -1.73
PEX3P56589 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.24□□□□□ -1.73
PEX3P56589 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.24□□□□□ -1.73
PEX3P56589 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.24□□□□□ -1.73
PEX3P56589 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.24□□□□□ -1.73
PEX3P56589 AL109618.2-201ENST00000605527 211 ntBASIC4.24□□□□□ -1.73
PEX3P56589 MIR8084-201ENST00000614105 89 ntBASIC4.24□□□□□ -1.73
PEX3P56589 MIR4727-201ENST00000622232 55 ntBASIC4.24□□□□□ -1.73
PEX3P56589 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.24□□□□□ -1.73
PEX3P56589 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PEX3P56589 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
PEX3P56589 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 RNU6-244P-201ENST00000391028 104 ntBASIC4.23□□□□□ -1.73
PEX3P56589 RNU6-796P-201ENST00000391086 107 ntBASIC4.23□□□□□ -1.73
PEX3P56589 ZNF602P-201ENST00000405929 924 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AL606495.1-201ENST00000422100 813 ntBASIC4.23□□□□□ -1.73
PEX3P56589 OR6K4P-201ENST00000423179 955 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AL158073.1-201ENST00000426848 1104 ntBASIC4.23□□□□□ -1.73
PEX3P56589 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 HMGB3P5-201ENST00000428894 612 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.23□□□□□ -1.73
PEX3P56589 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 APOOP2-201ENST00000461561 539 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AC091959.2-201ENST00000477363 321 ntBASIC4.23□□□□□ -1.73
PEX3P56589 MTCO2P9-201ENST00000503214 694 ntBASIC4.23□□□□□ -1.73
PEX3P56589 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 AC112206.4-201ENST00000515142 405 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AC093853.1-201ENST00000515689 483 ntBASIC4.23□□□□□ -1.73
PEX3P56589 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.23□□□□□ -1.73
PEX3P56589 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.23□□□□□ -1.73
PEX3P56589 AC113192.3-201ENST00000529152 742 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.23□□□□□ -1.73
PEX3P56589 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.23□□□□□ -1.73
PEX3P56589 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.23□□□□□ -1.73
PEX3P56589 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.23□□□□□ -1.73
PEX3P56589 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 AC025946.2-201ENST00000603398 234 ntBASIC4.23□□□□□ -1.73
PEX3P56589 BNIP3P19-201ENST00000605397 577 ntBASIC4.23□□□□□ -1.73
PEX3P56589 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 MIR6715B-201ENST00000637172 77 ntBASIC4.23□□□□□ -1.73
PEX3P56589 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.23□□□□□ -1.73
PEX3P56589 AL031985.3-201ENST00000565390 2449 ntBASIC4.23□□□□□ -1.73
PEX3P56589 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PEX3P56589 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.23□□□□□ -1.73
PEX3P56589 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.22□□□□□ -1.73
PEX3P56589 CASC19-284ENST00000642142 1868 ntBASIC4.22□□□□□ -1.73
PEX3P56589 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 Z73965.1-201ENST00000623412 2297 ntBASIC4.22□□□□□ -1.73
PEX3P56589 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 OR4A15-201ENST00000314706 1035 ntBASIC4.22□□□□□ -1.73
PEX3P56589 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 MIR320B1-201ENST00000390209 79 ntBASIC4.22□□□□□ -1.73
PEX3P56589 RPL32P23-201ENST00000397237 405 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AL445189.1-201ENST00000405722 338 ntBASIC4.22□□□□□ -1.73
PEX3P56589 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 RN7SKP156-201ENST00000410308 342 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.22□□□□□ -1.73
PEX3P56589 XKRYP4-201ENST00000414395 483 ntBASIC4.22□□□□□ -1.73
PEX3P56589 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 VN1R42P-201ENST00000424651 344 ntBASIC4.22□□□□□ -1.73
PEX3P56589 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.22□□□□□ -1.73
PEX3P56589 AC022022.1-201ENST00000430304 178 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AL512637.2-201ENST00000431287 1256 ntBASIC4.22□□□□□ -1.73
PEX3P56589 MTCO1P52-201ENST00000433928 531 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.22□□□□□ -1.73
PEX3P56589 SDR42E1P3-201ENST00000438345 502 ntBASIC4.22□□□□□ -1.73
PEX3P56589 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.22□□□□□ -1.73
PEX3P56589 XKRYP5-201ENST00000449659 483 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.22□□□□□ -1.73
PEX3P56589 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PEX3P56589 RPS26P15-201ENST00000488067 348 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC104629.1-201ENST00000494226 508 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms