Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC4P56524 AC006971.1-201ENST00000407916 4486 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HDAC4P56524 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HDAC4P56524 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HDAC4P56524 AC138393.1-206ENST00000540997 1886 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.71□□□□□ -1.66
HDAC4P56524 MTND4P8-201ENST00000514997 1362 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HDAC4P56524 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
HDAC4P56524 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HDAC4P56524 RNU1-87P-201ENST00000363727 170 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HDAC4P56524 AF228730.1-201ENST00000397972 663 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 MTND4P13-201ENST00000402078 1023 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 HDGFP1-201ENST00000405943 252 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 RPS3AP37-201ENST00000419176 745 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 NANOGP2-201ENST00000435391 727 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 CR769776.1-201ENST00000441254 787 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 RPL23AP43-201ENST00000446445 471 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 Z73417.1-201ENST00000447373 778 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 HMGB3P21-201ENST00000452483 547 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC4P56524 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC4P56524 AC073522.1-201ENST00000483312 377 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 AC018797.3-201ENST00000513388 1241 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 SNORD116-26-201ENST00000516006 96 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 AC008562.1-201ENST00000521763 330 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 OR4A2P-201ENST00000527276 913 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 DUXAP5-201ENST00000529668 529 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.71□□□□□ -1.66
HDAC4P56524 OR4U1P-201ENST00000554958 912 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 MTND3P12-201ENST00000559068 328 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 ATP5J2P6-201ENST00000565203 266 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC4P56524 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC4P56524 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 NTAN1P1-201ENST00000603150 646 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 MTND3P19-201ENST00000603825 345 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC002487.1-201ENST00000604565 994 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC107952.2-201ENST00000606048 486 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AP002360.3-201ENST00000607673 710 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC009237.15-201ENST00000610252 501 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 AC019226.2-201ENST00000625973 424 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.71□□□□□ -1.66
HDAC4P56524 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.71□□□□□ -1.66
HDAC4P56524 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC011266.1-201ENST00000624119 3569 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 AC099786.3-201ENST00000565735 1410 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 DHX40P1-201ENST00000588725 1412 ntBASIC4.71□□□□□ -1.66
HDAC4P56524 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
HDAC4P56524 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
HDAC4P56524 AC017104.4-201ENST00000636283 1592 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC4P56524 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 AC139769.1-204ENST00000472297 1931 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 EOGT-210ENST00000615922 1931 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
HDAC4P56524 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 OR4K15-201ENST00000305051 1216 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 SNORD116-12-201ENST00000384468 92 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 FCF1P5-201ENST00000406490 482 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 AL603766.1-201ENST00000407763 664 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 RNU2-6P-201ENST00000411404 190 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC4P56524 EIF4EP1-201ENST00000422311 642 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 RWDD4P2-201ENST00000426392 563 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 DNAJC19P7-201ENST00000428811 344 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC4P56524 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HDAC4P56524 AL591719.1-201ENST00000444669 744 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC4P56524 MTCO2P6-201ENST00000463134 685 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC4P56524 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms