Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIM2P55344 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIM2P55344 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.73□□□□□ -1.81
LIM2P55344 RN7SKP227-201ENST00000364445 330 ntBASIC3.73□□□□□ -1.81
LIM2P55344 SNORA40.4-201ENST00000390971 128 ntBASIC3.73□□□□□ -1.81
LIM2P55344 ZNF603P-201ENST00000405613 487 ntBASIC3.73□□□□□ -1.81
LIM2P55344 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.73□□□□□ -1.81
LIM2P55344 OR5AW1P-201ENST00000426334 1006 ntBASIC3.73□□□□□ -1.81
LIM2P55344 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.73□□□□□ -1.81
LIM2P55344 AF228730.2-201ENST00000438784 848 ntBASIC3.73□□□□□ -1.81
LIM2P55344 HMGB1P37-201ENST00000439613 609 ntBASIC3.73□□□□□ -1.81
LIM2P55344 RPL21P89-201ENST00000444021 467 ntBASIC3.73□□□□□ -1.81
LIM2P55344 ARL5AP2-201ENST00000444698 533 ntBASIC3.73□□□□□ -1.81
LIM2P55344 YWHAQP9-201ENST00000445891 512 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.73□□□□□ -1.81
LIM2P55344 AC010683.1-201ENST00000473673 378 ntBASIC3.73□□□□□ -1.81
LIM2P55344 RPS4XP15-201ENST00000489210 795 ntBASIC3.73□□□□□ -1.81
LIM2P55344 TPT1P3-201ENST00000492841 512 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.73□□□□□ -1.81
LIM2P55344 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.73□□□□□ -1.81
LIM2P55344 AC113192.3-201ENST00000529152 742 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.73□□□□□ -1.81
LIM2P55344 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.73□□□□□ -1.81
LIM2P55344 AC120057.2-201ENST00000571520 271 ntBASIC3.73□□□□□ -1.81
LIM2P55344 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 AC090312.1-201ENST00000580637 348 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AL592436.1-201ENST00000605135 558 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AP003392.5-201ENST00000607857 415 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AL359715.5-201ENST00000623431 443 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AC093875.1-201ENST00000623688 504 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AP000720.1-201ENST00000625091 483 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AC068724.3-201ENST00000625906 87 ntBASIC3.73□□□□□ -1.81
LIM2P55344 AC007529.1-201ENST00000418574 2178 ntBASIC3.73□□□□□ -1.81
LIM2P55344 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.73□□□□□ -1.81
LIM2P55344 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.73□□□□□ -1.81
LIM2P55344 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
LIM2P55344 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIM2P55344 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LIM2P55344 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.72□□□□□ -1.81
LIM2P55344 AL049737.1-201ENST00000413920 1403 ntBASIC3.72□□□□□ -1.81
LIM2P55344 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIM2P55344 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.72□□□□□ -1.81
LIM2P55344 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.72□□□□□ -1.81
LIM2P55344 MIR16-2-201ENST00000362117 81 ntBASIC3.72□□□□□ -1.81
LIM2P55344 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIM2P55344 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.72□□□□□ -1.81
LIM2P55344 PPIAP31-201ENST00000405422 495 ntBASIC3.72□□□□□ -1.81
LIM2P55344 RNU6-628P-201ENST00000410675 107 ntBASIC3.72□□□□□ -1.81
LIM2P55344 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 SAGE2P-201ENST00000420011 2126 ntBASIC3.72□□□□□ -1.81
LIM2P55344 OR8F1P-201ENST00000425243 930 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AL512661.1-201ENST00000434586 1253 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.72□□□□□ -1.81
LIM2P55344 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 CYCSP53-201ENST00000455540 265 ntBASIC3.72□□□□□ -1.81
LIM2P55344 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.72□□□□□ -1.81
LIM2P55344 AC006511.1-201ENST00000470614 315 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.72□□□□□ -1.81
LIM2P55344 AC112518.2-201ENST00000508565 425 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC121161.1-201ENST00000510606 652 ntBASIC3.72□□□□□ -1.81
LIM2P55344 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.72□□□□□ -1.81
LIM2P55344 RN7SKP21-201ENST00000516503 220 ntBASIC3.72□□□□□ -1.81
LIM2P55344 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC087369.1-201ENST00000520775 996 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC008562.1-201ENST00000521763 330 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIM2P55344 OR8R1P-201ENST00000543943 764 ntBASIC3.72□□□□□ -1.81
LIM2P55344 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIM2P55344 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.72□□□□□ -1.81
LIM2P55344 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.72□□□□□ -1.81
LIM2P55344 AC106785.3-201ENST00000564064 847 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AGGF1P6-201ENST00000569213 976 ntBASIC3.72□□□□□ -1.81
LIM2P55344 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 AC125494.3-201ENST00000602759 455 ntBASIC3.72□□□□□ -1.81
LIM2P55344 MRPS35P3-201ENST00000603189 709 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC133552.5-201ENST00000604266 540 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC067959.1-201ENST00000604334 379 ntBASIC3.72□□□□□ -1.81
LIM2P55344 HMGB1P50-201ENST00000605814 607 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.72□□□□□ -1.81
LIM2P55344 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.72□□□□□ -1.81
LIM2P55344 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
LIM2P55344 AC068831.8-201ENST00000620171 435 ntBASIC3.72□□□□□ -1.81
LIM2P55344 AC006249.1-201ENST00000621223 471 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms