Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPL7P48-201ENST00000461513 746 ntBASIC4.4□□□□□ -1.71
VCPP55072 AP000926.1-201ENST00000479573 241 ntBASIC4.4□□□□□ -1.71
VCPP55072 AC006517.1-201ENST00000480485 328 ntBASIC4.4□□□□□ -1.71
VCPP55072 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.4□□□□□ -1.71
VCPP55072 AF213884.1-201ENST00000488102 463 ntBASIC4.4□□□□□ -1.71
VCPP55072 HMGB1P3-201ENST00000502802 616 ntBASIC4.4□□□□□ -1.71
VCPP55072 AC099522.1-202ENST00000514718 367 ntBASIC4.4□□□□□ -1.71
VCPP55072 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.4□□□□□ -1.71
VCPP55072 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.4□□□□□ -1.71
VCPP55072 AC090281.1-201ENST00000523019 276 ntBASIC4.4□□□□□ -1.71
VCPP55072 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.4□□□□□ -1.71
VCPP55072 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.4□□□□□ -1.71
VCPP55072 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.4□□□□□ -1.71
VCPP55072 AC027807.1-201ENST00000559921 996 ntBASIC4.4□□□□□ -1.71
VCPP55072 ABI1P1-201ENST00000603375 1120 ntBASIC4.4□□□□□ -1.71
VCPP55072 AC135803.1-201ENST00000608748 565 ntBASIC4.4□□□□□ -1.71
VCPP55072 AL162574.2-201ENST00000614618 657 ntBASIC4.4□□□□□ -1.71
VCPP55072 AP003072.4-201ENST00000624580 310 ntBASIC4.4□□□□□ -1.71
VCPP55072 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.4□□□□□ -1.71
VCPP55072 AC024560.2-201ENST00000507981 1497 ntBASIC4.4□□□□□ -1.71
VCPP55072 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VCPP55072 MAPK10-253ENST00000641010 4072 ntBASIC4.4□□□□□ -1.71
VCPP55072 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VCPP55072 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VCPP55072 AC090229.1-201ENST00000590983 1609 ntBASIC4.39□□□□□ -1.71
VCPP55072 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VCPP55072 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.39□□□□□ -1.71
VCPP55072 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VCPP55072 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.39□□□□□ -1.71
VCPP55072 PTMAP5-201ENST00000393073 333 ntBASIC4.39□□□□□ -1.71
VCPP55072 MIR1179-201ENST00000408703 91 ntBASIC4.39□□□□□ -1.71
VCPP55072 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.39□□□□□ -1.71
VCPP55072 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 BOLA3P4-201ENST00000418151 400 ntBASIC4.39□□□□□ -1.71
VCPP55072 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 RPL30P3-201ENST00000424262 333 ntBASIC4.39□□□□□ -1.71
VCPP55072 NANOGP6-201ENST00000429190 847 ntBASIC4.39□□□□□ -1.71
VCPP55072 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.39□□□□□ -1.71
VCPP55072 ELOCP8-201ENST00000439309 332 ntBASIC4.39□□□□□ -1.71
VCPP55072 RPL23AP89-201ENST00000439324 255 ntBASIC4.39□□□□□ -1.71
VCPP55072 ELOCP15-201ENST00000442090 332 ntBASIC4.39□□□□□ -1.71
VCPP55072 AL451050.1-201ENST00000450126 415 ntBASIC4.39□□□□□ -1.71
VCPP55072 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VCPP55072 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.39□□□□□ -1.71
VCPP55072 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 AC025554.1-201ENST00000505641 188 ntBASIC4.39□□□□□ -1.71
VCPP55072 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.39□□□□□ -1.71
VCPP55072 KCTD9P2-201ENST00000512203 1013 ntBASIC4.39□□□□□ -1.71
VCPP55072 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.39□□□□□ -1.71
VCPP55072 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.39□□□□□ -1.71
VCPP55072 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.39□□□□□ -1.71
VCPP55072 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.39□□□□□ -1.71
VCPP55072 AC040174.2-201ENST00000602701 465 ntBASIC4.39□□□□□ -1.71
VCPP55072 AC068790.5-201ENST00000602741 355 ntBASIC4.39□□□□□ -1.71
VCPP55072 AC090525.3-201ENST00000605601 189 ntBASIC4.39□□□□□ -1.71
VCPP55072 AL355802.4-201ENST00000607635 548 ntBASIC4.39□□□□□ -1.71
VCPP55072 AL355816.1-201ENST00000607951 118 ntBASIC4.39□□□□□ -1.71
VCPP55072 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
VCPP55072 MIR6500-201ENST00000622700 86 ntBASIC4.39□□□□□ -1.71
VCPP55072 AC007342.8-201ENST00000623278 678 ntBASIC4.39□□□□□ -1.71
VCPP55072 AL136964.1-201ENST00000622038 2990 ntBASIC4.39□□□□□ -1.71
VCPP55072 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VCPP55072 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
VCPP55072 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VCPP55072 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VCPP55072 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VCPP55072 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
VCPP55072 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VCPP55072 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.38□□□□□ -1.71
VCPP55072 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VCPP55072 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VCPP55072 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VCPP55072 RNU11-4P-201ENST00000391149 133 ntBASIC4.38□□□□□ -1.71
VCPP55072 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.38□□□□□ -1.71
VCPP55072 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 FTH1P6-201ENST00000430768 320 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 MTND2P21-201ENST00000436242 1042 ntBASIC4.38□□□□□ -1.71
VCPP55072 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.38□□□□□ -1.71
VCPP55072 RAD23BP3-201ENST00000454157 1152 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC007967.1-201ENST00000455422 1159 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC023050.1-201ENST00000498198 304 ntBASIC4.38□□□□□ -1.71
VCPP55072 COL6A4P2-205ENST00000509855 506 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 AC026403.1-201ENST00000518938 295 ntBASIC4.38□□□□□ -1.71
VCPP55072 HMGB1P46-201ENST00000520062 610 ntBASIC4.38□□□□□ -1.71
VCPP55072 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.38□□□□□ -1.71
VCPP55072 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.38□□□□□ -1.71
VCPP55072 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms