Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC069234.5-201ENST00000611056 416 ntBASIC5.04□□□□□ -1.6
CACNA2D1P54289 AC074140.1-201ENST00000621617 208 ntBASIC5.04□□□□□ -1.6
CACNA2D1P54289 AC109454.4-201ENST00000623411 649 ntBASIC5.04□□□□□ -1.6
CACNA2D1P54289 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.04□□□□□ -1.6
CACNA2D1P54289 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.04□□□□□ -1.6
CACNA2D1P54289 AP000776.1-201ENST00000530032 1663 ntBASIC5.04□□□□□ -1.6
CACNA2D1P54289 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CACNA2D1P54289 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CACNA2D1P54289 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.04□□□□□ -1.6
CACNA2D1P54289 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CACNA2D1P54289 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CACNA2D1P54289 AL355852.1-201ENST00000454081 1771 ntBASIC5.04□□□□□ -1.6
CACNA2D1P54289 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CACNA2D1P54289 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 CASC19-204ENST00000641001 2055 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 VDAC2P1-201ENST00000399358 958 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 RPL23AP59-201ENST00000399415 461 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 ARL4AP5-201ENST00000404372 599 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL136131.1-201ENST00000406079 803 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 RNU2-16P-201ENST00000410712 136 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 Y_RNA.625-201ENST00000411256 107 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 USP9YP33-201ENST00000412220 421 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 PGBD4P8-201ENST00000412993 562 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 LINC01347-201ENST00000417964 355 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC069213.2-201ENST00000420238 366 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 FO393419.3-201ENST00000428741 282 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 NEK4P1-201ENST00000433383 879 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL357520.1-201ENST00000441557 453 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 RPL23AP76-201ENST00000441860 458 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC023512.1-201ENST00000444513 499 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 TPMTP4-201ENST00000450749 678 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 CDC42P1-201ENST00000456658 548 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL445433.1-201ENST00000457507 257 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC006967.1-201ENST00000467608 589 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 SETP11-201ENST00000473027 690 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 RN7SL459P-201ENST00000481078 302 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC008549.1-201ENST00000512900 643 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 TCP11X3P-202ENST00000514289 1254 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 ENPP7P9-201ENST00000514456 627 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AP000859.1-201ENST00000525536 307 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL139174.1-201ENST00000531489 886 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 FKBP1BP1-201ENST00000553366 325 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL110118.1-201ENST00000553543 400 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC079075.1-201ENST00000559543 878 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 EIF1P4-201ENST00000572664 335 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC068020.1-201ENST00000594215 661 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC130352.1-201ENST00000602979 661 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 U73023.1-201ENST00000603134 700 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 RNF138P2-201ENST00000603490 592 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC233280.2-201ENST00000603917 1070 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC008745.1-201ENST00000604064 271 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 U6atac.1-201ENST00000616025 117 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AL607023.1-201ENST00000620045 248 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AP000346.3-201ENST00000622821 210 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC010435.1-201ENST00000623353 1177 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC011815.3-201ENST00000624194 473 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC012020.1-201ENST00000624541 1728 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 AC005332.5-201ENST00000591222 2919 ntBASIC5.03□□□□□ -1.6
CACNA2D1P54289 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CACNA2D1P54289 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CACNA2D1P54289 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CACNA2D1P54289 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.02□□□□□ -1.61
CACNA2D1P54289 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CACNA2D1P54289 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.02□□□□□ -1.61
CACNA2D1P54289 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms