Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH6P52701 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH6P52701 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH6P52701 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
MSH6P52701 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.98□□□□□ -1.61
MSH6P52701 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
MSH6P52701 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH6P52701 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 RNU6-249P-201ENST00000363016 102 ntBASIC4.98□□□□□ -1.61
MSH6P52701 SNORA81-201ENST00000408493 178 ntBASIC4.98□□□□□ -1.61
MSH6P52701 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.98□□□□□ -1.61
MSH6P52701 ELOCP18-201ENST00000434209 337 ntBASIC4.98□□□□□ -1.61
MSH6P52701 RPS6P2-201ENST00000454208 705 ntBASIC4.98□□□□□ -1.61
MSH6P52701 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH6P52701 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.98□□□□□ -1.61
MSH6P52701 IGHV3-63-201ENST00000518422 341 ntBASIC4.98□□□□□ -1.61
MSH6P52701 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.98□□□□□ -1.61
MSH6P52701 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH6P52701 AL121594.4-201ENST00000556211 1196 ntBASIC4.98□□□□□ -1.61
MSH6P52701 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH6P52701 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 AC006023.1-201ENST00000603944 259 ntBASIC4.98□□□□□ -1.61
MSH6P52701 AL451049.1-201ENST00000608672 497 ntBASIC4.98□□□□□ -1.61
MSH6P52701 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH6P52701 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH6P52701 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 MTCO1P24-201ENST00000515438 1558 ntBASIC4.98□□□□□ -1.61
MSH6P52701 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH6P52701 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH6P52701 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH6P52701 SRP72P2-201ENST00000344851 1979 ntBASIC4.97□□□□□ -1.61
MSH6P52701 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 SNORD74.4-201ENST00000364129 80 ntBASIC4.97□□□□□ -1.61
MSH6P52701 RNA5SP126-201ENST00000365092 109 ntBASIC4.97□□□□□ -1.61
MSH6P52701 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.97□□□□□ -1.61
MSH6P52701 BX119904.1-201ENST00000432026 348 ntBASIC4.97□□□□□ -1.61
MSH6P52701 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.97□□□□□ -1.61
MSH6P52701 RPL7P28-201ENST00000437739 740 ntBASIC4.97□□□□□ -1.61
MSH6P52701 AL645931.1-201ENST00000439737 410 ntBASIC4.97□□□□□ -1.61
MSH6P52701 AC069285.2-201ENST00000440210 275 ntBASIC4.97□□□□□ -1.61
MSH6P52701 Z75741.1-201ENST00000446793 314 ntBASIC4.97□□□□□ -1.61
MSH6P52701 HMGB3P13-201ENST00000511263 607 ntBASIC4.97□□□□□ -1.61
MSH6P52701 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.97□□□□□ -1.61
MSH6P52701 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.97□□□□□ -1.61
MSH6P52701 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.97□□□□□ -1.61
MSH6P52701 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.97□□□□□ -1.61
MSH6P52701 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.97□□□□□ -1.61
MSH6P52701 AP003072.5-201ENST00000623872 773 ntBASIC4.97□□□□□ -1.61
MSH6P52701 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.97□□□□□ -1.61
MSH6P52701 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
MSH6P52701 BTBD10P1-201ENST00000549824 1352 ntBASIC4.97□□□□□ -1.61
MSH6P52701 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.97□□□□□ -1.61
MSH6P52701 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MSH6P52701 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
MSH6P52701 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MSH6P52701 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 RNA5SP432-201ENST00000362480 116 ntBASIC4.96□□□□□ -1.62
MSH6P52701 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH6P52701 AC002524.1-201ENST00000411687 547 ntBASIC4.96□□□□□ -1.62
MSH6P52701 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH6P52701 U3.44-201ENST00000458938 192 ntBASIC4.96□□□□□ -1.62
MSH6P52701 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MSH6P52701 FTH1P24-201ENST00000503502 462 ntBASIC4.96□□□□□ -1.62
MSH6P52701 AC027309.2-201ENST00000520566 192 ntBASIC4.96□□□□□ -1.62
MSH6P52701 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.96□□□□□ -1.62
MSH6P52701 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH6P52701 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
MSH6P52701 AL163642.2-201ENST00000604722 1019 ntBASIC4.96□□□□□ -1.62
MSH6P52701 RNU6-84P-201ENST00000607737 102 ntBASIC4.96□□□□□ -1.62
MSH6P52701 AC128687.2-201ENST00000609657 566 ntBASIC4.96□□□□□ -1.62
MSH6P52701 U4.6-201ENST00000621618 127 ntBASIC4.96□□□□□ -1.62
MSH6P52701 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH6P52701 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
MSH6P52701 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.96□□□□□ -1.62
MSH6P52701 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MSH6P52701 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
MSH6P52701 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.96□□□□□ -1.62
MSH6P52701 AC119744.1-201ENST00000454746 1715 ntBASIC4.96□□□□□ -1.62
MSH6P52701 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH6P52701 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH6P52701 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MSH6P52701 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
MSH6P52701 GSTA8P-201ENST00000404253 637 ntBASIC4.95□□□□□ -1.62
MSH6P52701 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms