Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
GTF2A1P52655 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
GTF2A1P52655 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
GTF2A1P52655 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GTF2A1P52655 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GTF2A1P52655 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GTF2A1P52655 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.54□□□□□ -1.84
GTF2A1P52655 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GTF2A1P52655 HMGB3P18-201ENST00000406327 590 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.54□□□□□ -1.84
GTF2A1P52655 RPL7AP73-201ENST00000413490 353 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.54□□□□□ -1.84
GTF2A1P52655 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.54□□□□□ -1.84
GTF2A1P52655 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.54□□□□□ -1.84
GTF2A1P52655 USP9YP9-201ENST00000429406 715 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.54□□□□□ -1.84
GTF2A1P52655 RPS3AP54-201ENST00000435535 734 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 ISCA1P2-201ENST00000438679 421 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.54□□□□□ -1.84
GTF2A1P52655 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.54□□□□□ -1.84
GTF2A1P52655 RPS15AP1-201ENST00000457423 391 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 MTND2P28-201ENST00000457540 1044 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.54□□□□□ -1.84
GTF2A1P52655 RN7SL499P-201ENST00000481141 276 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 HMGB3P14-201ENST00000494195 599 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.54□□□□□ -1.84
GTF2A1P52655 AC078918.1-201ENST00000498515 228 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 OR5H3P-201ENST00000502817 919 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 NDUFA5P12-201ENST00000503796 343 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.54□□□□□ -1.84
GTF2A1P52655 AC147055.1-201ENST00000509261 750 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 RNA5SP179-201ENST00000517284 121 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.54□□□□□ -1.84
GTF2A1P52655 AC068831.4-201ENST00000556118 109 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AC025627.2-201ENST00000576220 160 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 MIR5684-201ENST00000585074 65 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 PSMA6P4-201ENST00000603247 718 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AL161616.1-201ENST00000611867 286 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AL357559.1-201ENST00000622228 274 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 AC073348.1-201ENST00000623002 331 ntBASIC3.54□□□□□ -1.84
GTF2A1P52655 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GTF2A1P52655 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GTF2A1P52655 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.54□□□□□ -1.84
GTF2A1P52655 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GTF2A1P52655 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.53□□□□□ -1.84
GTF2A1P52655 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
GTF2A1P52655 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GTF2A1P52655 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GTF2A1P52655 AL137100.1-201ENST00000556703 1620 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RPL7P26-201ENST00000333817 754 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RNU1-132P-201ENST00000364300 164 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RNU6-304P-201ENST00000364855 107 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.53□□□□□ -1.84
GTF2A1P52655 RPL23AP47-201ENST00000408017 460 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RPS29P17-201ENST00000430795 166 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 HIGD1AP11-201ENST00000438361 280 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RPS4XP4-201ENST00000443195 763 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 AL157884.3-201ENST00000448273 1184 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.53□□□□□ -1.84
GTF2A1P52655 RNA5SP246-201ENST00000458909 119 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RN7SL75P-201ENST00000461926 281 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 RPS4XP14-201ENST00000493072 781 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.53□□□□□ -1.84
GTF2A1P52655 SEC11B-201ENST00000518383 499 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.53□□□□□ -1.84
GTF2A1P52655 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.53□□□□□ -1.84
GTF2A1P52655 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.53□□□□□ -1.84
GTF2A1P52655 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.53□□□□□ -1.84
GTF2A1P52655 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 MIR7703-201ENST00000620784 77 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 MIR6719-201ENST00000622428 87 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 LRRC77P-213ENST00000637727 880 ntBASIC3.53□□□□□ -1.84
GTF2A1P52655 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GTF2A1P52655 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
GTF2A1P52655 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GTF2A1P52655 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 CUL4AP1-201ENST00000514750 1863 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 AC079741.1-201ENST00000321498 212 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 RN7SKP278-201ENST00000410504 342 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.52□□□□□ -1.85
GTF2A1P52655 RPL7P10-201ENST00000417407 739 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 HIGD1AP12-201ENST00000427832 281 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AC104332.2-201ENST00000429959 156 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 COX6B1P7-201ENST00000430845 235 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 OR4C10P-201ENST00000434991 931 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.52□□□□□ -1.85
GTF2A1P52655 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GTF2A1P52655 AL513533.1-201ENST00000453728 415 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 RNU6-1218P-201ENST00000458990 108 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.52□□□□□ -1.85
GTF2A1P52655 RPL7P1-201ENST00000468161 747 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 RPL7P9-201ENST00000468715 747 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AC074386.1-201ENST00000476560 767 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AL161747.1-201ENST00000480068 358 ntBASIC3.52□□□□□ -1.85
GTF2A1P52655 AC111000.3-201ENST00000508057 576 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms