Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-98P-201ENST00000384173 107 ntBASIC6.24□□□□□ -1.41
USP11P51784 RNU6-878P-201ENST00000384578 110 ntBASIC6.24□□□□□ -1.41
USP11P51784 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
USP11P51784 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.24□□□□□ -1.41
USP11P51784 PDCL2P1-201ENST00000419302 352 ntBASIC6.24□□□□□ -1.41
USP11P51784 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 AC099670.2-201ENST00000435130 321 ntBASIC6.24□□□□□ -1.41
USP11P51784 RPL7P29-201ENST00000437151 728 ntBASIC6.24□□□□□ -1.41
USP11P51784 RABEPKP1-201ENST00000440529 1026 ntBASIC6.24□□□□□ -1.41
USP11P51784 AC105399.1-202ENST00000447303 205 ntBASIC6.24□□□□□ -1.41
USP11P51784 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.24□□□□□ -1.41
USP11P51784 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.24□□□□□ -1.41
USP11P51784 RPL7AP52-201ENST00000458096 790 ntBASIC6.24□□□□□ -1.41
USP11P51784 ACTR3P3-201ENST00000480448 893 ntBASIC6.24□□□□□ -1.41
USP11P51784 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.24□□□□□ -1.41
USP11P51784 AC108693.1-201ENST00000496068 432 ntBASIC6.24□□□□□ -1.41
USP11P51784 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.24□□□□□ -1.41
USP11P51784 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.24□□□□□ -1.41
USP11P51784 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.24□□□□□ -1.41
USP11P51784 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.24□□□□□ -1.41
USP11P51784 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.24□□□□□ -1.41
USP11P51784 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.24□□□□□ -1.41
USP11P51784 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.24□□□□□ -1.41
USP11P51784 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.24□□□□□ -1.41
USP11P51784 AC116158.1-201ENST00000560231 2129 ntBASIC6.24□□□□□ -1.41
USP11P51784 AC138915.2-201ENST00000569776 97 ntBASIC6.24□□□□□ -1.41
USP11P51784 AC034268.2-201ENST00000571784 482 ntBASIC6.24□□□□□ -1.41
USP11P51784 RPL12P25-202ENST00000598100 674 ntBASIC6.24□□□□□ -1.41
USP11P51784 RNA5SP439-201ENST00000617595 124 ntBASIC6.24□□□□□ -1.41
USP11P51784 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.24□□□□□ -1.41
USP11P51784 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 AC144833.1-201ENST00000567953 4089 ntBASIC6.24□□□□□ -1.41
USP11P51784 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 GTF2H2B-203ENST00000508065 1432 ntBASIC6.24□□□□□ -1.41
USP11P51784 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 AC107982.1-201ENST00000507171 1300 ntBASIC6.24□□□□□ -1.41
USP11P51784 OR5BR1P-201ENST00000524992 1330 ntBASIC6.24□□□□□ -1.41
USP11P51784 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
USP11P51784 MTND5P23-201ENST00000430812 1655 ntBASIC6.23□□□□□ -1.41
USP11P51784 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.23□□□□□ -1.41
USP11P51784 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 AC092681.1-201ENST00000297369 291 ntBASIC6.23□□□□□ -1.41
USP11P51784 Y_RNA.1-201ENST00000352915 104 ntBASIC6.23□□□□□ -1.41
USP11P51784 RNU6-1085P-201ENST00000363576 107 ntBASIC6.23□□□□□ -1.41
USP11P51784 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
USP11P51784 RPSAP35-201ENST00000413753 818 ntBASIC6.23□□□□□ -1.41
USP11P51784 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 AC079355.1-201ENST00000421770 223 ntBASIC6.23□□□□□ -1.41
USP11P51784 USP9YP36-201ENST00000424581 829 ntBASIC6.23□□□□□ -1.41
USP11P51784 MTCO2P12-201ENST00000427426 682 ntBASIC6.23□□□□□ -1.41
USP11P51784 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 AC009961.2-201ENST00000435771 251 ntBASIC6.23□□□□□ -1.41
USP11P51784 MTND6P13-201ENST00000443510 523 ntBASIC6.23□□□□□ -1.41
USP11P51784 SPRYD7P1-201ENST00000443861 570 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC079448.1-201ENST00000449377 373 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC239798.3-201ENST00000454459 408 ntBASIC6.23□□□□□ -1.41
USP11P51784 MTCO3P20-201ENST00000454926 688 ntBASIC6.23□□□□□ -1.41
USP11P51784 RN7SL547P-201ENST00000490793 290 ntBASIC6.23□□□□□ -1.41
USP11P51784 KLRA1P-201ENST00000503499 986 ntBASIC6.23□□□□□ -1.41
USP11P51784 KCTD9P5-201ENST00000504141 1170 ntBASIC6.23□□□□□ -1.41
USP11P51784 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 HMGB1P28-201ENST00000507778 552 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC097486.1-201ENST00000515331 210 ntBASIC6.23□□□□□ -1.41
USP11P51784 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 RN7SKP99-201ENST00000517028 307 ntBASIC6.23□□□□□ -1.41
USP11P51784 AP002812.4-201ENST00000532139 286 ntBASIC6.23□□□□□ -1.41
USP11P51784 AL512310.1-201ENST00000548639 172 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.23□□□□□ -1.41
USP11P51784 AC078814.3-201ENST00000553036 491 ntBASIC6.23□□□□□ -1.41
USP11P51784 TRAV15-201ENST00000556680 249 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.23□□□□□ -1.41
USP11P51784 MIR3176-201ENST00000582210 90 ntBASIC6.23□□□□□ -1.41
USP11P51784 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.23□□□□□ -1.41
USP11P51784 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.23□□□□□ -1.41
USP11P51784 AC000068.2-201ENST00000608816 460 ntBASIC6.23□□□□□ -1.41
USP11P51784 AL139124.1-201ENST00000609123 421 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC103710.4-201ENST00000609301 899 ntBASIC6.23□□□□□ -1.41
USP11P51784 Z95327.3-201ENST00000610385 572 ntBASIC6.23□□□□□ -1.41
USP11P51784 AC010205.1-201ENST00000616668 449 ntBASIC6.23□□□□□ -1.41
USP11P51784 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
USP11P51784 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP11P51784 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
USP11P51784 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
USP11P51784 AP005435.3-201ENST00000531260 3198 ntBASIC6.22□□□□□ -1.41
USP11P51784 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP11P51784 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.22□□□□□ -1.41
USP11P51784 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms