Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.02□□□□□ -1.45
SMARCA4P51532 MIR7106-201ENST00000612419 65 ntBASIC6.02□□□□□ -1.45
SMARCA4P51532 AC100793.4-201ENST00000613683 429 ntBASIC6.02□□□□□ -1.45
SMARCA4P51532 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.02□□□□□ -1.45
SMARCA4P51532 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMARCA4P51532 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.02□□□□□ -1.45
SMARCA4P51532 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMARCA4P51532 RN7SKP199-201ENST00000410325 305 ntBASIC6.01□□□□□ -1.45
SMARCA4P51532 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.01□□□□□ -1.45
SMARCA4P51532 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.01□□□□□ -1.45
SMARCA4P51532 AC006028.1-201ENST00000438379 402 ntBASIC6.01□□□□□ -1.45
SMARCA4P51532 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.01□□□□□ -1.45
SMARCA4P51532 SNORD39.4-201ENST00000620099 78 ntBASIC6.01□□□□□ -1.45
SMARCA4P51532 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.01□□□□□ -1.45
SMARCA4P51532 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMARCA4P51532 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMARCA4P51532 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMARCA4P51532 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMARCA4P51532 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMARCA4P51532 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6□□□□□ -1.45
SMARCA4P51532 SNORA7.4-201ENST00000384249 137 ntBASIC6□□□□□ -1.45
SMARCA4P51532 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6□□□□□ -1.45
SMARCA4P51532 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6□□□□□ -1.45
SMARCA4P51532 TEX41-209ENST00000451478 452 ntTSL 2 BASIC6□□□□□ -1.45
SMARCA4P51532 HIGD1AP3-201ENST00000515857 278 ntBASIC6□□□□□ -1.45
SMARCA4P51532 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6□□□□□ -1.45
SMARCA4P51532 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6□□□□□ -1.45
SMARCA4P51532 DLD-214ENST00000639772 421 ntTSL 5 BASIC6□□□□□ -1.45
SMARCA4P51532 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6□□□□□ -1.45
SMARCA4P51532 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMARCA4P51532 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMARCA4P51532 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6□□□□□ -1.45
SMARCA4P51532 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SMARCA4P51532 AC117434.1-201ENST00000419971 836 ntBASIC5.99□□□□□ -1.45
SMARCA4P51532 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.99□□□□□ -1.45
SMARCA4P51532 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.99□□□□□ -1.45
SMARCA4P51532 HMGB3P14-201ENST00000494195 599 ntBASIC5.99□□□□□ -1.45
SMARCA4P51532 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.99□□□□□ -1.45
SMARCA4P51532 DUXAP6-201ENST00000553858 601 ntBASIC5.99□□□□□ -1.45
SMARCA4P51532 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA4P51532 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA4P51532 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA4P51532 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SMARCA4P51532 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA4P51532 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SMARCA4P51532 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA4P51532 MRPL35P4-201ENST00000453682 566 ntBASIC5.99□□□□□ -1.45
SMARCA4P51532 RPS29P26-201ENST00000477483 171 ntBASIC5.99□□□□□ -1.45
SMARCA4P51532 AC091826.1-201ENST00000514065 313 ntBASIC5.99□□□□□ -1.45
SMARCA4P51532 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.99□□□□□ -1.45
SMARCA4P51532 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.99□□□□□ -1.45
SMARCA4P51532 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.99□□□□□ -1.45
SMARCA4P51532 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.99□□□□□ -1.45
SMARCA4P51532 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SMARCA4P51532 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMARCA4P51532 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
SMARCA4P51532 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA4P51532 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SMARCA4P51532 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.98□□□□□ -1.45
SMARCA4P51532 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.98□□□□□ -1.45
SMARCA4P51532 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
SMARCA4P51532 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA4P51532 SNORA48.8-201ENST00000391324 134 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 AL138885.1-201ENST00000405921 675 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 AC233982.1-201ENST00000451247 436 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA4P51532 KC877373.1-201ENST00000479066 408 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA4P51532 AC010486.1-201ENST00000511793 424 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.98□□□□□ -1.45
SMARCA4P51532 AC026333.2-201ENST00000542164 106 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.98□□□□□ -1.45
SMARCA4P51532 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA4P51532 MIR3945-201ENST00000581853 98 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.98□□□□□ -1.45
SMARCA4P51532 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA4P51532 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
SMARCA4P51532 SRP72P2-201ENST00000344851 1979 ntBASIC5.98□□□□□ -1.45
SMARCA4P51532 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMARCA4P51532 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.97□□□□□ -1.45
SMARCA4P51532 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA4P51532 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SMARCA4P51532 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA4P51532 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA4P51532 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SMARCA4P51532 AL513175.1-201ENST00000431492 780 ntBASIC5.97□□□□□ -1.45
SMARCA4P51532 ELOCP18-201ENST00000434209 337 ntBASIC5.97□□□□□ -1.45
SMARCA4P51532 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.97□□□□□ -1.45
SMARCA4P51532 PSMA2P1-201ENST00000526365 646 ntBASIC5.97□□□□□ -1.45
SMARCA4P51532 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.97□□□□□ -1.45
SMARCA4P51532 MIR2682-201ENST00000580305 110 ntBASIC5.97□□□□□ -1.45
SMARCA4P51532 MIR6715A-201ENST00000615929 79 ntBASIC5.97□□□□□ -1.45
SMARCA4P51532 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.97□□□□□ -1.45
SMARCA4P51532 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA4P51532 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMARCA4P51532 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMARCA4P51532 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA4P51532 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMARCA4P51532 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms