Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.24□□□□□ -1.41
RNF144AP50876 AC005618.1-201ENST00000606901 3148 ntBASIC6.24□□□□□ -1.41
RNF144AP50876 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF144AP50876 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 CAP1P2-201ENST00000417455 1409 ntBASIC6.24□□□□□ -1.41
RNF144AP50876 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF144AP50876 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF144AP50876 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RNF144AP50876 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF144AP50876 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
RNF144AP50876 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RNF144AP50876 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 RNU6-82P-201ENST00000363970 107 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 RNU6-450P-201ENST00000364654 107 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 RNU6-33P-201ENST00000384793 107 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 MIR27A-201ENST00000385073 78 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 MIR431-201ENST00000385266 114 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 EIF4E2P1-201ENST00000393781 255 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AL023807.1-201ENST00000407932 359 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 NMD3P2-201ENST00000421815 761 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AL139184.1-202ENST00000422303 222 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF144AP50876 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 HMGB1P4-201ENST00000455362 567 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 BX323845.2-201ENST00000458382 234 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 RN7SL654P-201ENST00000479178 292 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 RN7SL849P-201ENST00000485236 295 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 MRPL57P6-201ENST00000506570 309 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF144AP50876 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF144AP50876 SNX18P23-201ENST00000510867 677 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 RNU6-1016P-201ENST00000516689 94 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF144AP50876 SOD1P3-201ENST00000518682 454 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF144AP50876 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF144AP50876 SETP2-201ENST00000553886 926 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 MIR4312-201ENST00000579909 76 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RNF144AP50876 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 AL355365.1-201ENST00000616480 294 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 U1.34-201ENST00000618578 162 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AC120057.5-201ENST00000623840 154 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 MIR665-201ENST00000635949 72 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF144AP50876 AC002525.1-201ENST00000624392 1622 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 AC022031.1-201ENST00000585985 2593 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RNF144AP50876 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 AP000432.2-201ENST00000624164 2048 ntBASIC6.23□□□□□ -1.41
RNF144AP50876 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RNF144AP50876 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF144AP50876 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF144AP50876 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF144AP50876 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF144AP50876 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 OR10D1P-201ENST00000355343 936 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RNU6-490P-201ENST00000362985 107 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 Y_RNA.152-201ENST00000363578 100 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 U3.11-201ENST00000364476 212 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 AC074375.1-201ENST00000372993 192 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF144AP50876 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF144AP50876 SNORA75.6-201ENST00000391318 127 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 AL359694.1-201ENST00000403247 604 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms