Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 RPL21P134-201ENST00000453468 483 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RPL10P17-201ENST00000453852 316 ntBASIC5.75□□□□□ -1.49
MRE11P49959 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 snoU13.22-201ENST00000459428 104 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 RPL7P16-201ENST00000479738 738 ntBASIC5.75□□□□□ -1.49
MRE11P49959 GAPDHP36-201ENST00000480688 918 ntBASIC5.75□□□□□ -1.49
MRE11P49959 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 DSTNP2-201ENST00000504533 515 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC112198.1-201ENST00000505369 1220 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC022447.1-201ENST00000515358 464 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RN7SKP21-201ENST00000516503 220 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RN7SKP147-201ENST00000517154 244 ntBASIC5.75□□□□□ -1.49
MRE11P49959 HIGD1AP10-201ENST00000527837 282 ntBASIC5.75□□□□□ -1.49
MRE11P49959 MTCYBP41-201ENST00000528913 1123 ntBASIC5.75□□□□□ -1.49
MRE11P49959 YWHABP2-201ENST00000540201 713 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.75□□□□□ -1.49
MRE11P49959 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 MIR3611-201ENST00000584484 83 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AP001542.2-201ENST00000593141 364 ntBASIC5.75□□□□□ -1.49
MRE11P49959 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.75□□□□□ -1.49
MRE11P49959 AC068790.7-201ENST00000602347 528 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC125494.3-201ENST00000602759 455 ntBASIC5.75□□□□□ -1.49
MRE11P49959 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 SNX18P1Y-201ENST00000616231 511 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC009237.17-201ENST00000618111 748 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC009878.1-201ENST00000621819 340 ntBASIC5.75□□□□□ -1.49
MRE11P49959 MFSD8-245ENST00000641743 948 ntBASIC5.75□□□□□ -1.49
MRE11P49959 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
MRE11P49959 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 AC138393.1-206ENST00000540997 1886 ntBASIC5.75□□□□□ -1.49
MRE11P49959 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
MRE11P49959 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
MRE11P49959 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MRE11P49959 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
MRE11P49959 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 AP000542.2-201ENST00000623199 6179 ntBASIC5.74□□□□□ -1.49
MRE11P49959 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
MRE11P49959 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.74□□□□□ -1.49
MRE11P49959 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.74□□□□□ -1.49
MRE11P49959 EIF4EP1-201ENST00000422311 642 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC108075.1-201ENST00000424692 529 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 AL451062.2-201ENST00000427515 271 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 YWHAEP5-201ENST00000431545 765 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.74□□□□□ -1.49
MRE11P49959 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.74□□□□□ -1.49
MRE11P49959 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.74□□□□□ -1.49
MRE11P49959 AC093899.1-201ENST00000457984 376 ntBASIC5.74□□□□□ -1.49
MRE11P49959 CCDC75P1-201ENST00000469247 791 ntBASIC5.74□□□□□ -1.49
MRE11P49959 RPL7P40-201ENST00000481703 745 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.74□□□□□ -1.49
MRE11P49959 RPS4XP18-201ENST00000495480 763 ntBASIC5.74□□□□□ -1.49
MRE11P49959 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.74□□□□□ -1.49
MRE11P49959 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.74□□□□□ -1.49
MRE11P49959 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.74□□□□□ -1.49
MRE11P49959 AC012616.1-201ENST00000600294 197 ntBASIC5.74□□□□□ -1.49
MRE11P49959 RPL26P30-202ENST00000602923 645 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AL136363.2-201ENST00000604173 851 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.74□□□□□ -1.49
MRE11P49959 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.74□□□□□ -1.49
MRE11P49959 AC121761.2-201ENST00000617300 689 ntBASIC5.74□□□□□ -1.49
MRE11P49959 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 AC022509.4-201ENST00000621404 572 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC008785.1-201ENST00000624475 456 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AL160394.1-201ENST00000624765 724 ntBASIC5.74□□□□□ -1.49
MRE11P49959 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.74□□□□□ -1.49
MRE11P49959 AC068724.3-201ENST00000625906 87 ntBASIC5.74□□□□□ -1.49
MRE11P49959 AC055839.1-201ENST00000634467 498 ntBASIC5.74□□□□□ -1.49
MRE11P49959 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MRE11P49959 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.74□□□□□ -1.49
MRE11P49959 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
MRE11P49959 AL138820.1-201ENST00000617901 5305 ntBASIC5.73□□□□□ -1.49
MRE11P49959 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
MRE11P49959 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MRE11P49959 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MRE11P49959 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MRE11P49959 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms