Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 AC090515.3-201ENST00000560431 315 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 GTF2IP8-201ENST00000560687 584 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 HNRNPCP4-201ENST00000571636 900 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 VN1R79P-201ENST00000593540 513 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 AC069304.3-201ENST00000603938 1084 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 HMGB1P50-201ENST00000605814 607 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC072039.2-201ENST00000608883 439 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC084782.3-201ENST00000612282 578 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC243654.2-201ENST00000612843 443 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL392048.1-201ENST00000613946 534 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL049794.2-201ENST00000616301 365 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL603755.1-201ENST00000619504 163 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC015804.1-201ENST00000622935 435 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 AC011493.1-201ENST00000596753 1632 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC096656.1-201ENST00000623826 1364 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXA1P49639 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 SAMMSON-226ENST00000642089 1582 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA1P49639 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA1P49639 AL353743.4-201ENST00000422653 1547 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC053481.2-202ENST00000582394 1500 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA1P49639 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXA1P49639 Y_RNA.318-201ENST00000365131 97 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXA1P49639 AL133264.1-201ENST00000407157 562 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 OR3A2-201ENST00000408891 1076 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXA1P49639 AL136133.1-201ENST00000413694 376 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 EIF4HP2-201ENST00000424380 563 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA1P49639 RPL7L1P9-201ENST00000431298 745 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 USP9YP31-201ENST00000431405 881 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA1P49639 AL354941.1-201ENST00000438600 464 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA1P49639 RPS27AP8-201ENST00000452665 445 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 RNU6-1218P-201ENST00000458990 108 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 RPS3AP43-201ENST00000479743 781 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 VPS26AP1-201ENST00000483197 979 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 RPS21P4-201ENST00000487122 248 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 RN7SL184P-201ENST00000488308 297 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA1P49639 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA1P49639 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
HOXA1P49639 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 AC010285.3-201ENST00000511668 676 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 RNU6-202P-201ENST00000515998 96 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA1P49639 AF279873.1-201ENST00000523393 313 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA1P49639 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA1P49639 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXA1P49639 AL049779.2-201ENST00000553847 315 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC090888.3-201ENST00000558917 509 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXA1P49639 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA1P49639 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA1P49639 VN1R90P-201ENST00000595717 726 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC011445.2-201ENST00000599274 173 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC146944.4-201ENST00000602697 718 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA1P49639 AC087783.2-201ENST00000605070 562 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 OR2AS2P-201ENST00000606902 342 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AC090527.3-201ENST00000619041 548 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA1P49639 OR52B5P-202ENST00000641118 1110 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 AL445437.1-201ENST00000623157 3087 ntBASIC3.97□□□□□ -1.77
HOXA1P49639 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HOXA1P49639 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA1P49639 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA1P49639 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
HOXA1P49639 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms