Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPA3P35244 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPA3P35244 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
RPA3P35244 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.68□□□□□ -1.82
RPA3P35244 MTND4LP31-201ENST00000514859 294 ntBASIC3.68□□□□□ -1.82
RPA3P35244 RN7SKP60-201ENST00000516985 239 ntBASIC3.68□□□□□ -1.82
RPA3P35244 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.68□□□□□ -1.82
RPA3P35244 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.68□□□□□ -1.82
RPA3P35244 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPA3P35244 MTCO2P22-201ENST00000603246 681 ntBASIC3.68□□□□□ -1.82
RPA3P35244 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.68□□□□□ -1.82
RPA3P35244 AL391834.1-201ENST00000609609 560 ntBASIC3.68□□□□□ -1.82
RPA3P35244 uc_338.9-201ENST00000617424 182 ntBASIC3.68□□□□□ -1.82
RPA3P35244 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
RPA3P35244 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
RPA3P35244 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPA3P35244 AL592437.2-201ENST00000421655 2434 ntBASIC3.68□□□□□ -1.82
RPA3P35244 AC007656.2-201ENST00000624902 4547 ntBASIC3.67□□□□□ -1.82
RPA3P35244 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 AC093311.1-201ENST00000506586 2021 ntBASIC3.67□□□□□ -1.82
RPA3P35244 RIOK3P1-201ENST00000418778 1528 ntBASIC3.67□□□□□ -1.82
RPA3P35244 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 OR4A15-201ENST00000314706 1035 ntBASIC3.67□□□□□ -1.82
RPA3P35244 RN7SKP280-201ENST00000364196 304 ntBASIC3.67□□□□□ -1.82
RPA3P35244 RNA5SP235-201ENST00000365411 114 ntBASIC3.67□□□□□ -1.82
RPA3P35244 FABP12P1-201ENST00000401911 322 ntBASIC3.67□□□□□ -1.82
RPA3P35244 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.67□□□□□ -1.82
RPA3P35244 NPM1P24-201ENST00000428039 894 ntBASIC3.67□□□□□ -1.82
RPA3P35244 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.67□□□□□ -1.82
RPA3P35244 BMS1P19-201ENST00000433925 393 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.67□□□□□ -1.82
RPA3P35244 AL645931.1-201ENST00000439737 410 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.67□□□□□ -1.82
RPA3P35244 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.67□□□□□ -1.82
RPA3P35244 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.67□□□□□ -1.82
RPA3P35244 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.67□□□□□ -1.82
RPA3P35244 HMGB3P14-201ENST00000494195 599 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AC026402.1-201ENST00000513642 170 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.67□□□□□ -1.82
RPA3P35244 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.67□□□□□ -1.82
RPA3P35244 AL121766.1-201ENST00000547436 487 ntBASIC3.67□□□□□ -1.82
RPA3P35244 TRAV15-201ENST00000556680 249 ntBASIC3.67□□□□□ -1.82
RPA3P35244 TGIF1P1-201ENST00000558095 802 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AP005901.4-201ENST00000577336 569 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AC107982.3-201ENST00000584957 985 ntBASIC3.67□□□□□ -1.82
RPA3P35244 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 AC115621.1-201ENST00000604653 858 ntBASIC3.67□□□□□ -1.82
RPA3P35244 AC138473.1-201ENST00000605717 526 ntBASIC3.67□□□□□ -1.82
RPA3P35244 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.67□□□□□ -1.82
RPA3P35244 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.67□□□□□ -1.82
RPA3P35244 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPA3P35244 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPA3P35244 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPA3P35244 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RPA3P35244 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.66□□□□□ -1.82
RPA3P35244 AL590704.1-201ENST00000402856 794 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AL356967.1-201ENST00000406305 431 ntBASIC3.66□□□□□ -1.82
RPA3P35244 RN7SKP156-201ENST00000410308 342 ntBASIC3.66□□□□□ -1.82
RPA3P35244 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.66□□□□□ -1.82
RPA3P35244 OSTCP5-201ENST00000425293 453 ntBASIC3.66□□□□□ -1.82
RPA3P35244 RWDD4P2-201ENST00000426392 563 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AL390879.2-203ENST00000426943 1121 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AC092017.2-201ENST00000427600 362 ntBASIC3.66□□□□□ -1.82
RPA3P35244 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPA3P35244 AC084357.1-201ENST00000473404 255 ntBASIC3.66□□□□□ -1.82
RPA3P35244 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
RPA3P35244 RWDD4P1-201ENST00000488019 565 ntBASIC3.66□□□□□ -1.82
RPA3P35244 CDH12P2-201ENST00000504393 298 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AC108043.1-201ENST00000512696 574 ntBASIC3.66□□□□□ -1.82
RPA3P35244 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.66□□□□□ -1.82
RPA3P35244 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.66□□□□□ -1.82
RPA3P35244 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.66□□□□□ -1.82
RPA3P35244 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.66□□□□□ -1.82
RPA3P35244 AC091515.1-201ENST00000548110 679 ntBASIC3.66□□□□□ -1.82
RPA3P35244 BNIP3P5-201ENST00000562290 498 ntBASIC3.66□□□□□ -1.82
RPA3P35244 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.66□□□□□ -1.82
RPA3P35244 AC009101.1-201ENST00000568135 242 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AC087499.8-201ENST00000578406 226 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AC022884.3-201ENST00000579571 248 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.66□□□□□ -1.82
RPA3P35244 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPA3P35244 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.66□□□□□ -1.82
RPA3P35244 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.66□□□□□ -1.82
RPA3P35244 AL451086.1-201ENST00000605596 223 ntBASIC3.66□□□□□ -1.82
RPA3P35244 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.66□□□□□ -1.82
RPA3P35244 AL391261.4-201ENST00000616012 481 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AL590410.1-201ENST00000617925 333 ntBASIC3.66□□□□□ -1.82
RPA3P35244 AC020978.9-201ENST00000624380 1141 ntBASIC3.66□□□□□ -1.82
RPA3P35244 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.66□□□□□ -1.82
RPA3P35244 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RPA3P35244 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms