Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.03□□□□□ -1.76
COL4A5P29400 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.03□□□□□ -1.76
COL4A5P29400 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A5P29400 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC006028.1-201ENST00000438379 402 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.03□□□□□ -1.76
COL4A5P29400 RPS29P26-201ENST00000477483 171 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 NPM1P17-201ENST00000479221 602 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A5P29400 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.03□□□□□ -1.76
COL4A5P29400 EIF1P6-201ENST00000600054 334 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 BRDTP1-201ENST00000605735 677 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 OR7M1P-201ENST00000608946 533 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
COL4A5P29400 SRP72P2-201ENST00000344851 1979 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A5P29400 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A5P29400 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A5P29400 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A5P29400 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A5P29400 OR5H2-201ENST00000355273 945 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COL4A5P29400 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A5P29400 AC117434.1-201ENST00000419971 836 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 OR6K4P-201ENST00000423179 955 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A5P29400 ELOCP18-201ENST00000434209 337 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 ARL4AP1-201ENST00000503220 705 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.02□□□□□ -1.77
COL4A5P29400 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A5P29400 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.02□□□□□ -1.77
COL4A5P29400 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 BMS1P21-201ENST00000634565 365 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 AC008079.2-201ENST00000623543 20396 ntBASIC4.02□□□□□ -1.77
COL4A5P29400 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
COL4A5P29400 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
COL4A5P29400 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.02□□□□□ -1.77
COL4A5P29400 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A5P29400 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A5P29400 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
COL4A5P29400 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A5P29400 AL160175.1-201ENST00000428124 247 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 AL139132.1-201ENST00000431587 344 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 ATP5HP2-201ENST00000433885 485 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 AC006484.1-201ENST00000435086 1884 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 ANP32BP2-201ENST00000454525 545 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 AC010486.1-201ENST00000511793 424 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 AC026333.2-201ENST00000542164 106 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 HIGD1AP1-201ENST00000550979 275 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.01□□□□□ -1.77
COL4A5P29400 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.01□□□□□ -1.77
COL4A5P29400 AC020914.4-201ENST00000597690 277 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL4A5P29400 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A5P29400 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A5P29400 AC006504.1-201ENST00000562493 3666 ntBASIC4.01□□□□□ -1.77
COL4A5P29400 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL4A5P29400 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A5P29400 MIR449A-201ENST00000362113 91 ntBASIC4□□□□□ -1.77
COL4A5P29400 SNORA5B-201ENST00000363786 132 ntBASIC4□□□□□ -1.77
COL4A5P29400 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4□□□□□ -1.77
COL4A5P29400 AC010374.2-201ENST00000512933 535 ntBASIC4□□□□□ -1.77
COL4A5P29400 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4□□□□□ -1.77
COL4A5P29400 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4□□□□□ -1.77
COL4A5P29400 AC022080.3-201ENST00000544433 482 ntBASIC4□□□□□ -1.77
COL4A5P29400 DUXAP6-201ENST00000553858 601 ntBASIC4□□□□□ -1.77
COL4A5P29400 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4□□□□□ -1.77
COL4A5P29400 RPL12P50-201ENST00000603116 116 ntBASIC4□□□□□ -1.77
COL4A5P29400 AP003392.5-201ENST00000607857 415 ntBASIC4□□□□□ -1.77
COL4A5P29400 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4□□□□□ -1.77
COL4A5P29400 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4□□□□□ -1.77
COL4A5P29400 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
COL4A5P29400 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
COL4A5P29400 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL4A5P29400 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4□□□□□ -1.77
COL4A5P29400 RHOT1P2-201ENST00000366423 333 ntBASIC4□□□□□ -1.77
COL4A5P29400 AL138885.1-201ENST00000405921 675 ntBASIC4□□□□□ -1.77
COL4A5P29400 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4□□□□□ -1.77
COL4A5P29400 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4□□□□□ -1.77
COL4A5P29400 KC877373.1-201ENST00000479066 408 ntBASIC4□□□□□ -1.77
COL4A5P29400 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4□□□□□ -1.77
COL4A5P29400 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4□□□□□ -1.77
COL4A5P29400 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4□□□□□ -1.77
COL4A5P29400 MIR2682-201ENST00000580305 110 ntBASIC4□□□□□ -1.77
COL4A5P29400 PCA3_2.1-201ENST00000612507 409 ntBASIC4□□□□□ -1.77
COL4A5P29400 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
COL4A5P29400 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL4A5P29400 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A5P29400 RNU6-283P-201ENST00000364788 107 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 RN7SKP97-201ENST00000410966 333 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.99□□□□□ -1.77
COL4A5P29400 RPL35AP12-201ENST00000425362 338 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 AL513175.1-201ENST00000431492 780 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 HMGB3P22-202ENST00000451823 572 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms