Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PDSS1P2-201ENST00000449397 678 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC006480.1-201ENST00000449887 378 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 EIF4A1P11-201ENST00000451239 222 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.12□□□□□ -1.91
COL8A2P25067 SEPT7P6-201ENST00000469999 1143 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 TRBV12-2-201ENST00000489763 344 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 OR52A4P-203ENST00000498233 1014 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.12□□□□□ -1.91
COL8A2P25067 AC006499.5-201ENST00000505037 514 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.12□□□□□ -1.91
COL8A2P25067 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL8A2P25067 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 AC010342.1-201ENST00000514047 877 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 RN7SKP18-201ENST00000516005 275 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 IGHV3-32-201ENST00000519182 355 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 SUMO2P20-201ENST00000520803 283 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.12□□□□□ -1.91
COL8A2P25067 CCNG2P1-201ENST00000549521 1000 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.12□□□□□ -1.91
COL8A2P25067 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 CCDC58P3-201ENST00000590792 430 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 BNIP3P22-201ENST00000593399 556 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC010591.1-201ENST00000603941 649 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC110741.2-201ENST00000605278 268 ntBASIC3.12□□□□□ -1.91
COL8A2P25067 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.12□□□□□ -1.91
COL8A2P25067 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
COL8A2P25067 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
COL8A2P25067 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL8A2P25067 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
COL8A2P25067 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL8A2P25067 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL8A2P25067 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 MIR7-3-201ENST00000384898 110 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 HLFP1-201ENST00000402375 499 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 MIR1183-201ENST00000408856 89 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
COL8A2P25067 RPS29P4-201ENST00000414733 161 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 MTCYBP7-201ENST00000419540 1134 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.11□□□□□ -1.91
COL8A2P25067 RPL23AP4-201ENST00000427757 463 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AL353597.2-202ENST00000434901 373 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AL356535.1-201ENST00000440335 398 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 RAB28P3-201ENST00000448325 597 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.11□□□□□ -1.91
COL8A2P25067 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.11□□□□□ -1.91
COL8A2P25067 AC008802.1-201ENST00000519121 791 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.11□□□□□ -1.91
COL8A2P25067 IGKV2D-19-201ENST00000523346 262 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.11□□□□□ -1.91
COL8A2P25067 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.11□□□□□ -1.91
COL8A2P25067 VN1R79P-201ENST00000593540 513 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.11□□□□□ -1.91
COL8A2P25067 AC138473.1-201ENST00000605717 526 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC012213.4-201ENST00000606457 354 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC017076.1-201ENST00000607613 578 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AP003392.5-201ENST00000607857 415 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC069200.1-201ENST00000609511 323 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC020658.4-201ENST00000613987 684 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.11□□□□□ -1.91
COL8A2P25067 AC016957.2-201ENST00000616998 848 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AC020978.9-201ENST00000624380 1141 ntBASIC3.11□□□□□ -1.91
COL8A2P25067 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.11□□□□□ -1.91
COL8A2P25067 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.11□□□□□ -1.91
COL8A2P25067 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL8A2P25067 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.11□□□□□ -1.91
COL8A2P25067 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.1□□□□□ -1.91
COL8A2P25067 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
COL8A2P25067 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL8A2P25067 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL8A2P25067 AC093719.1-202ENST00000392735 373 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 ATP5F1P4-201ENST00000397288 746 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.1□□□□□ -1.91
COL8A2P25067 AC068533.1-201ENST00000418542 415 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AC244453.4-201ENST00000419150 388 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.1□□□□□ -1.91
COL8A2P25067 OR5AW1P-201ENST00000426334 1006 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 USP12PY-201ENST00000427677 1064 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 HIGD1AP12-201ENST00000427832 281 ntBASIC3.1□□□□□ -1.91
COL8A2P25067 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.1□□□□□ -1.91
COL8A2P25067 AC099063.2-201ENST00000446360 662 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms