Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RN7SL568P-201ENST00000493069 298 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC113367.2-201ENST00000505749 160 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC068831.4-201ENST00000556118 109 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC004817.2-201ENST00000561794 651 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 MRPS21P8-201ENST00000569196 235 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC138207.8-204ENST00000579588 527 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 MIR4503-201ENST00000582187 83 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC019193.3-201ENST00000609144 554 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AL442067.1-201ENST00000613261 223 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 AL133216.2-202ENST00000634512 349 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 OR2L1P-202ENST00000641567 1023 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 AC092447.10-201ENST00000620607 1652 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC005261.2-201ENST00000593427 4258 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.19□□□□□ -1.42
NFKB1P19838 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NFKB1P19838 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.19□□□□□ -1.42
NFKB1P19838 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 Y_RNA.100-201ENST00000363141 102 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 RNU6-984P-201ENST00000363236 109 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 Y_RNA.231-201ENST00000364358 102 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 RNU6-996P-201ENST00000365438 107 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 RNU6-744P-201ENST00000365557 107 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 RNU6-1316P-201ENST00000384242 108 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 RNY4P36-201ENST00000391116 96 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 U3.23-201ENST00000391132 200 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AL096829.1-201ENST00000413677 457 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.19□□□□□ -1.42
NFKB1P19838 RPS15AP30-201ENST00000420976 390 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC007283.2-201ENST00000424739 197 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.19□□□□□ -1.42
NFKB1P19838 AC010881.1-201ENST00000433830 235 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 AC007383.1-201ENST00000445875 636 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 HMGB1P7-201ENST00000450921 612 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC002553.3-201ENST00000453002 341 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 RNU7-152P-201ENST00000458982 64 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC104563.1-201ENST00000476147 376 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AP001025.2-201ENST00000490908 477 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AP002453.1-201ENST00000492327 668 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.19□□□□□ -1.42
NFKB1P19838 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.19□□□□□ -1.42
NFKB1P19838 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 RN7SKP67-201ENST00000515905 235 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.19□□□□□ -1.42
NFKB1P19838 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.19□□□□□ -1.42
NFKB1P19838 OR4T1P-201ENST00000554933 911 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.19□□□□□ -1.42
NFKB1P19838 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.19□□□□□ -1.42
NFKB1P19838 AC017100.2-201ENST00000584628 355 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 BBIP1P1-201ENST00000602999 279 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 SMIM12P1-201ENST00000603004 274 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC091925.1-201ENST00000623204 462 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 AC073488.6-201ENST00000632293 754 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
NFKB1P19838 CASC19-284ENST00000642142 1868 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 CASC19-204ENST00000641001 2055 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NFKB1P19838 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 AC022164.1-201ENST00000568767 2673 ntBASIC6.19□□□□□ -1.42
NFKB1P19838 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NFKB1P19838 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC016583.1-201ENST00000624221 2431 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms