Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HMGB3P9-201ENST00000441799 583 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 AL591363.1-201ENST00000450091 483 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGA1P17096 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA1P17096 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGA1P17096 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA1P17096 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGA1P17096 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA1P17096 AL121576.1-201ENST00000556055 276 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 AC099489.2-201ENST00000574976 260 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 ZNF415P1-201ENST00000582279 1166 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.54□□□□□ -1.84
HMGA1P17096 CKS1BP3-201ENST00000600888 237 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 AL606834.2-201ENST00000602954 668 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA1P17096 AL359715.5-201ENST00000623431 443 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGA1P17096 AL355596.1-201ENST00000565399 3996 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGA1P17096 AC058791.1-201ENST00000608412 3198 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGA1P17096 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGA1P17096 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 ZNF603P-201ENST00000405613 487 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGA1P17096 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 AC008280.1-201ENST00000418851 412 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 AC091862.1-201ENST00000438016 1100 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 CYCSP32-201ENST00000440548 321 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 AL357552.1-201ENST00000445254 415 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 FGF7P3-201ENST00000454645 303 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 snoU13.24-201ENST00000458998 104 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 AC112198.1-201ENST00000505369 1220 ntBASIC3.53□□□□□ -1.84
HMGA1P17096 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.53□□□□□ -1.84
HMGA1P17096 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGA1P17096 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGA1P17096 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
HMGA1P17096 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGA1P17096 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGA1P17096 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGA1P17096 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
HMGA1P17096 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 RNU6-525P-201ENST00000363685 104 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 SNORA38.1-201ENST00000364172 131 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 U3.19-201ENST00000390893 196 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 Z99755.1-201ENST00000414048 380 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 RPL5P24-201ENST00000463742 885 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGA1P17096 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGA1P17096 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGA1P17096 RPL21P12-201ENST00000559810 515 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 AC012493.2-201ENST00000595083 291 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 BNIP3P38-201ENST00000601117 544 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 AL451049.1-201ENST00000608672 497 ntBASIC3.52□□□□□ -1.85
HMGA1P17096 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGA1P17096 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGA1P17096 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGA1P17096 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 FAM35DP-201ENST00000323387 2712 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 GCNT6-201ENST00000379591 934 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 AL357075.1-201ENST00000404107 726 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGA1P17096 UBE2V1P1-201ENST00000430836 445 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA1P17096 RPL7P38-201ENST00000488396 739 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 RN7SL504P-201ENST00000494496 287 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA1P17096 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms