Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.23□□□□□ -1.73
CD48P09326 AL109741.3-201ENST00000561748 592 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.23□□□□□ -1.73
CD48P09326 MIR4789-201ENST00000577469 82 ntBASIC4.23□□□□□ -1.73
CD48P09326 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD48P09326 AC012417.1-201ENST00000582307 1039 ntBASIC4.23□□□□□ -1.73
CD48P09326 MIR5684-201ENST00000585074 65 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.23□□□□□ -1.73
CD48P09326 AC012254.4-201ENST00000588843 273 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.23□□□□□ -1.73
CD48P09326 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.23□□□□□ -1.73
CD48P09326 IPO5P1-202ENST00000600039 287 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC018618.2-201ENST00000604770 446 ntBASIC4.23□□□□□ -1.73
CD48P09326 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.23□□□□□ -1.73
CD48P09326 AC097065.2-201ENST00000608159 533 ntBASIC4.23□□□□□ -1.73
CD48P09326 AL445423.1-201ENST00000609941 536 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC079395.3-201ENST00000615161 484 ntBASIC4.23□□□□□ -1.73
CD48P09326 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.23□□□□□ -1.73
CD48P09326 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC024023.1-201ENST00000624530 922 ntBASIC4.23□□□□□ -1.73
CD48P09326 AC019226.2-201ENST00000625973 424 ntBASIC4.23□□□□□ -1.73
CD48P09326 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD48P09326 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD48P09326 AC005261.4-201ENST00000600047 1385 ntBASIC4.23□□□□□ -1.73
CD48P09326 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD48P09326 AC027287.1-201ENST00000553115 1453 ntBASIC4.23□□□□□ -1.73
CD48P09326 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 AL355578.1-201ENST00000607405 1328 ntBASIC4.22□□□□□ -1.73
CD48P09326 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.22□□□□□ -1.73
CD48P09326 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.22□□□□□ -1.73
CD48P09326 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CD48P09326 SNORD35B-201ENST00000363660 87 ntBASIC4.22□□□□□ -1.73
CD48P09326 RNU4-28P-201ENST00000364739 141 ntBASIC4.22□□□□□ -1.73
CD48P09326 U6.112-201ENST00000384129 70 ntBASIC4.22□□□□□ -1.73
CD48P09326 MIR141-201ENST00000384975 95 ntBASIC4.22□□□□□ -1.73
CD48P09326 OR6C69P-201ENST00000394268 893 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC233289.1-201ENST00000403700 508 ntBASIC4.22□□□□□ -1.73
CD48P09326 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
CD48P09326 RN7SKP33-201ENST00000410942 340 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC016397.1-201ENST00000412463 242 ntBASIC4.22□□□□□ -1.73
CD48P09326 HMGB3P31-201ENST00000413333 595 ntBASIC4.22□□□□□ -1.73
CD48P09326 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.22□□□□□ -1.73
CD48P09326 MTND2P16-201ENST00000419987 799 ntBASIC4.22□□□□□ -1.73
CD48P09326 RPL23AP38-201ENST00000423801 469 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC092648.1-201ENST00000425870 423 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC016712.1-201ENST00000431088 378 ntBASIC4.22□□□□□ -1.73
CD48P09326 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.22□□□□□ -1.73
CD48P09326 RPS4XP4-201ENST00000443195 763 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.22□□□□□ -1.73
CD48P09326 SEPT14P24-201ENST00000447236 180 ntBASIC4.22□□□□□ -1.73
CD48P09326 TPT1P13-201ENST00000449760 499 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.22□□□□□ -1.73
CD48P09326 RN7SL604P-201ENST00000492589 296 ntBASIC4.22□□□□□ -1.73
CD48P09326 RPL21P131-201ENST00000497298 483 ntBASIC4.22□□□□□ -1.73
CD48P09326 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.22□□□□□ -1.73
CD48P09326 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.22□□□□□ -1.73
CD48P09326 AC113420.1-201ENST00000507903 571 ntBASIC4.22□□□□□ -1.73
CD48P09326 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.22□□□□□ -1.73
CD48P09326 RNU6-1308P-201ENST00000516817 103 ntBASIC4.22□□□□□ -1.73
CD48P09326 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.22□□□□□ -1.73
CD48P09326 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 AC090888.2-201ENST00000559765 1144 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC069366.1-201ENST00000583159 838 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.22□□□□□ -1.73
CD48P09326 Z82195.1-201ENST00000604558 398 ntBASIC4.22□□□□□ -1.73
CD48P09326 AL451044.1-201ENST00000604867 238 ntBASIC4.22□□□□□ -1.73
CD48P09326 AP004607.9-201ENST00000618202 316 ntBASIC4.22□□□□□ -1.73
CD48P09326 AC006386.1-201ENST00000619436 415 ntBASIC4.22□□□□□ -1.73
CD48P09326 MIR8059-201ENST00000620427 81 ntBASIC4.22□□□□□ -1.73
CD48P09326 MTND2P41-201ENST00000637599 773 ntBASIC4.22□□□□□ -1.73
CD48P09326 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CD48P09326 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD48P09326 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CD48P09326 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD48P09326 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD48P09326 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD48P09326 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD48P09326 TAS2R15P-201ENST00000390674 928 ntBASIC4.21□□□□□ -1.74
CD48P09326 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.21□□□□□ -1.74
CD48P09326 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.21□□□□□ -1.74
CD48P09326 LINC01347-201ENST00000417964 355 ntBASIC4.21□□□□□ -1.74
CD48P09326 MTCO2P21-201ENST00000419780 677 ntBASIC4.21□□□□□ -1.74
CD48P09326 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.21□□□□□ -1.74
CD48P09326 FAR2P4-202ENST00000425399 584 ntBASIC4.21□□□□□ -1.74
CD48P09326 AL356276.2-201ENST00000435919 558 ntBASIC4.21□□□□□ -1.74
CD48P09326 Z77249.1-201ENST00000444622 1175 ntBASIC4.21□□□□□ -1.74
CD48P09326 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.21□□□□□ -1.74
CD48P09326 AC092685.1-201ENST00000447960 1243 ntBASIC4.21□□□□□ -1.74
CD48P09326 NUTF2P3-201ENST00000448540 384 ntBASIC4.21□□□□□ -1.74
CD48P09326 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD48P09326 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CD48P09326 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD48P09326 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms