Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC092902.1-201ENST00000486999 259 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.38□□□□□ -1.71
COL2A1P02458 AC096571.1-202ENST00000506634 735 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.38□□□□□ -1.71
COL2A1P02458 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.38□□□□□ -1.71
COL2A1P02458 IGHV3-63-201ENST00000518422 341 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 AC025857.1-201ENST00000525252 377 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.38□□□□□ -1.71
COL2A1P02458 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 AC010615.3-201ENST00000597319 394 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.38□□□□□ -1.71
COL2A1P02458 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 AC097504.2-201ENST00000608088 454 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 AC135803.1-201ENST00000608748 565 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 AC243654.2-201ENST00000612843 443 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 OR4G3P-201ENST00000633500 913 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 AL356118.1-201ENST00000635272 1078 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
COL2A1P02458 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
COL2A1P02458 AL512283.1-201ENST00000606756 1384 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 AC234772.1-201ENST00000377927 937 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 ANAPC10P1-201ENST00000395991 556 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 VPS26BP1-201ENST00000417155 755 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.37□□□□□ -1.71
COL2A1P02458 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 RBMY2UP-201ENST00000453474 324 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 APOOP2-201ENST00000461561 539 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AGGF1P3-201ENST00000493675 1213 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC006960.3-201ENST00000561845 705 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 CD24P2-201ENST00000565486 219 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 MTCYBP28-201ENST00000566728 1132 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.37□□□□□ -1.71
COL2A1P02458 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 MRPS35P3-201ENST00000603189 709 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 ABI1P1-201ENST00000603375 1120 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC012603.1-201ENST00000606424 528 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
COL2A1P02458 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC009159.2-201ENST00000617603 606 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AL109659.3-201ENST00000624985 950 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL2A1P02458 AL442128.2-201ENST00000620246 1824 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.37□□□□□ -1.71
COL2A1P02458 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.37□□□□□ -1.71
COL2A1P02458 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 CBX1P3-201ENST00000413296 527 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC092447.3-201ENST00000426027 686 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 FAR1P1-201ENST00000427163 934 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 ATP5HP2-201ENST00000433885 485 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.37□□□□□ -1.71
COL2A1P02458 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL2A1P02458 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC016550.1-201ENST00000505348 785 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.37□□□□□ -1.71
COL2A1P02458 AP001636.2-201ENST00000525517 696 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL2A1P02458 OR5B10P-201ENST00000532869 642 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.37□□□□□ -1.71
COL2A1P02458 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC006386.1-201ENST00000619436 415 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms