Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFP01375 AC007656.2-201ENST00000624902 4547 ntBASIC3.47□□□□□ -1.85
TNFP01375 AC073346.2-201ENST00000624724 2058 ntBASIC3.47□□□□□ -1.85
TNFP01375 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFP01375 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.46□□□□□ -1.85
TNFP01375 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFP01375 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFP01375 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.46□□□□□ -1.86
TNFP01375 FRG1CP-201ENST00000358464 769 ntBASIC3.46□□□□□ -1.86
TNFP01375 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
TNFP01375 RNA5SP267-201ENST00000364893 126 ntBASIC3.46□□□□□ -1.86
TNFP01375 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TNFP01375 ZNF603P-201ENST00000405613 487 ntBASIC3.46□□□□□ -1.86
TNFP01375 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.46□□□□□ -1.86
TNFP01375 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.46□□□□□ -1.86
TNFP01375 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.46□□□□□ -1.86
TNFP01375 RPL26P28-201ENST00000451325 435 ntBASIC3.46□□□□□ -1.86
TNFP01375 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
TNFP01375 RNU2-27P-201ENST00000516185 142 ntBASIC3.46□□□□□ -1.86
TNFP01375 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
TNFP01375 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.46□□□□□ -1.86
TNFP01375 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 AC068446.3-201ENST00000555285 382 ntBASIC3.46□□□□□ -1.86
TNFP01375 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.46□□□□□ -1.86
TNFP01375 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFP01375 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.46□□□□□ -1.86
TNFP01375 HMGB1P50-201ENST00000605814 607 ntBASIC3.46□□□□□ -1.86
TNFP01375 AC004825.2-201ENST00000616634 455 ntBASIC3.46□□□□□ -1.86
TNFP01375 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFP01375 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFP01375 AC017007.4-201ENST00000503353 1352 ntBASIC3.46□□□□□ -1.86
TNFP01375 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFP01375 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TNFP01375 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFP01375 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFP01375 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFP01375 AC093311.1-201ENST00000506586 2021 ntBASIC3.45□□□□□ -1.86
TNFP01375 MIR23A-201ENST00000385245 73 ntBASIC3.45□□□□□ -1.86
TNFP01375 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
TNFP01375 OR1AA1P-201ENST00000419597 916 ntBASIC3.45□□□□□ -1.86
TNFP01375 AL158156.1-201ENST00000422509 473 ntBASIC3.45□□□□□ -1.86
TNFP01375 AC106901.1-201ENST00000425086 698 ntBASIC3.45□□□□□ -1.86
TNFP01375 RPL23AP83-201ENST00000434984 473 ntBASIC3.45□□□□□ -1.86
TNFP01375 AC005019.1-201ENST00000436455 431 ntBASIC3.45□□□□□ -1.86
TNFP01375 RPS3AP12-201ENST00000443616 753 ntBASIC3.45□□□□□ -1.86
TNFP01375 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFP01375 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFP01375 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFP01375 AC005798.1-201ENST00000513715 387 ntBASIC3.45□□□□□ -1.86
TNFP01375 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFP01375 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFP01375 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFP01375 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.45□□□□□ -1.86
TNFP01375 AL360157.1-201ENST00000565962 87 ntBASIC3.45□□□□□ -1.86
TNFP01375 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFP01375 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.45□□□□□ -1.86
TNFP01375 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFP01375 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFP01375 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.45□□□□□ -1.86
TNFP01375 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFP01375 AC027287.1-201ENST00000553115 1453 ntBASIC3.45□□□□□ -1.86
TNFP01375 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFP01375 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TNFP01375 PNPT1P2-201ENST00000456768 2050 ntBASIC3.45□□□□□ -1.86
TNFP01375 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFP01375 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TNFP01375 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFP01375 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TNFP01375 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TNFP01375 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFP01375 NMD3P1-201ENST00000439704 1488 ntBASIC3.44□□□□□ -1.86
TNFP01375 RNU1-33P-201ENST00000364249 162 ntBASIC3.44□□□□□ -1.86
TNFP01375 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFP01375 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFP01375 RNU6-1279P-201ENST00000383917 103 ntBASIC3.44□□□□□ -1.86
TNFP01375 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
TNFP01375 HMGN2P8-201ENST00000391458 268 ntBASIC3.44□□□□□ -1.86
TNFP01375 RN7SKP53-201ENST00000411337 315 ntBASIC3.44□□□□□ -1.86
TNFP01375 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFP01375 RWDD4P2-201ENST00000426392 563 ntBASIC3.44□□□□□ -1.86
TNFP01375 AC006989.1-201ENST00000427212 131 ntBASIC3.44□□□□□ -1.86
TNFP01375 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TNFP01375 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFP01375 MTND4LP12-201ENST00000448237 295 ntBASIC3.44□□□□□ -1.86
TNFP01375 MTND2P25-201ENST00000449028 610 ntBASIC3.44□□□□□ -1.86
TNFP01375 RNU7-157P-201ENST00000459600 66 ntBASIC3.44□□□□□ -1.86
TNFP01375 AC104849.1-201ENST00000462623 405 ntBASIC3.44□□□□□ -1.86
TNFP01375 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFP01375 AC010307.1-201ENST00000467206 836 ntBASIC3.44□□□□□ -1.86
TNFP01375 RWDD4P1-201ENST00000488019 565 ntBASIC3.44□□□□□ -1.86
TNFP01375 AP000563.1-201ENST00000490865 758 ntBASIC3.44□□□□□ -1.86
TNFP01375 RPL23AP73-201ENST00000492507 471 ntBASIC3.44□□□□□ -1.86
TNFP01375 CAB39P1-201ENST00000502277 460 ntBASIC3.44□□□□□ -1.86
TNFP01375 HSPD1P15-201ENST00000505573 1122 ntBASIC3.44□□□□□ -1.86
TNFP01375 BTF3L4P4-201ENST00000506381 449 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms