Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RAPGEF3O95398 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 MIR548Y-201ENST00000582739 110 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 AP001542.2-201ENST00000593141 364 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 AL583856.2-201ENST00000606298 543 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 AL159169.3-201ENST00000608871 561 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 MIR7151-201ENST00000617477 60 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 AC139769.3-201ENST00000618383 175 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 AC097461.1-201ENST00000568928 2821 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 AC010300.1-201ENST00000600671 5134 ntBASIC6.46□□□□□ -1.38
RAPGEF3O95398 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RAPGEF3O95398 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RAPGEF3O95398 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RAPGEF3O95398 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RAPGEF3O95398 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RAPGEF3O95398 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RAPGEF3O95398 MTCO1P6-201ENST00000481192 1384 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 MIR525-201ENST00000384978 85 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL079342.2-201ENST00000403367 482 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC092745.2-202ENST00000411880 369 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC090686.1-201ENST00000481577 749 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 MTCO3P28-201ENST00000513351 515 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC107016.1-201ENST00000550463 337 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL442163.2-201ENST00000553912 710 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC120057.2-201ENST00000571520 271 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 MTCO1P40-201ENST00000574371 625 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL353778.1-201ENST00000603149 408 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AL391261.4-201ENST00000616012 481 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AP000648.2-201ENST00000624182 404 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 ZNF663P-202ENST00000641770 1131 ntBASIC6.45□□□□□ -1.38
RAPGEF3O95398 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RAPGEF3O95398 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.45□□□□□ -1.38
RAPGEF3O95398 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 RNU6-213P-201ENST00000384051 104 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 MIR218-2-201ENST00000385006 110 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 SNORA40.2-201ENST00000390847 128 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 SKINT1L-201ENST00000401057 817 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 NDUFB4P4-201ENST00000404822 243 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC009518.2-201ENST00000418056 731 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC092647.1-201ENST00000420654 287 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 UBE2V1P1-201ENST00000430836 445 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 ART2BP-201ENST00000453501 499 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 RNA5SP246-201ENST00000458909 119 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 BET1P1-201ENST00000482276 359 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 RPS4XP15-201ENST00000489210 795 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC026427.2-201ENST00000506228 536 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 SOD1P3-201ENST00000518682 454 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms