Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
USH2AO75445 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
USH2AO75445 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 TNPO1P3-201ENST00000436471 2662 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC010168.2-201ENST00000562691 5428 ntBASIC1.54□□□□□ -2.16
USH2AO75445 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 RNU6-482P-201ENST00000391068 107 ntBASIC1.53□□□□□ -2.16
USH2AO75445 MTHFD2P2-201ENST00000407725 247 ntBASIC1.53□□□□□ -2.16
USH2AO75445 ANXA2P1-201ENST00000505539 926 ntBASIC1.53□□□□□ -2.16
USH2AO75445 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.53□□□□□ -2.16
USH2AO75445 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC1.53□□□□□ -2.16
USH2AO75445 AC027281.1-201ENST00000574178 758 ntBASIC1.53□□□□□ -2.16
USH2AO75445 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 HSPD1P11-201ENST00000508643 1702 ntBASIC1.53□□□□□ -2.16
USH2AO75445 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 Y_RNA.338-201ENST00000365320 114 ntBASIC1.53□□□□□ -2.16
USH2AO75445 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 AC005189.1-201ENST00000431286 310 ntBASIC1.53□□□□□ -2.16
USH2AO75445 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 AL442163.2-201ENST00000553912 710 ntBASIC1.53□□□□□ -2.16
USH2AO75445 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 GVINP1-202ENST00000531871 7271 ntBASIC1.53□□□□□ -2.16
USH2AO75445 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
USH2AO75445 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.53□□□□□ -2.16
USH2AO75445 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 CD36-221ENST00000534394 1741 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 AL161781.1-201ENST00000354277 403 ntBASIC1.53□□□□□ -2.16
USH2AO75445 OR51A6P-201ENST00000418680 1004 ntBASIC1.53□□□□□ -2.16
USH2AO75445 HSPE1P6-201ENST00000479457 291 ntBASIC1.53□□□□□ -2.16
USH2AO75445 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC1.53□□□□□ -2.16
USH2AO75445 AC113430.1-201ENST00000506872 718 ntBASIC1.53□□□□□ -2.16
USH2AO75445 IGKV1OR2-1-201ENST00000514060 354 ntBASIC1.53□□□□□ -2.16
USH2AO75445 OR4C2P-201ENST00000530855 1064 ntBASIC1.53□□□□□ -2.16
USH2AO75445 AC090877.1-201ENST00000561418 344 ntBASIC1.53□□□□□ -2.16
USH2AO75445 IGHVIII-44-202ENST00000636235 289 ntBASIC1.53□□□□□ -2.16
USH2AO75445 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
USH2AO75445 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USH2AO75445 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.17
USH2AO75445 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.53□□□□□ -2.17
USH2AO75445 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
USH2AO75445 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
USH2AO75445 Z95331.1-201ENST00000623075 23112 ntBASIC1.53□□□□□ -2.17
USH2AO75445 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
USH2AO75445 ATF1P1-201ENST00000406040 927 ntBASIC1.53□□□□□ -2.17
USH2AO75445 OR2AS1P-201ENST00000427827 319 ntBASIC1.53□□□□□ -2.17
USH2AO75445 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC1.53□□□□□ -2.17
USH2AO75445 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
USH2AO75445 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.53□□□□□ -2.17
USH2AO75445 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.53□□□□□ -2.17
USH2AO75445 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC1.53□□□□□ -2.17
USH2AO75445 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC1.53□□□□□ -2.17
USH2AO75445 VN1R90P-201ENST00000595717 726 ntBASIC1.53□□□□□ -2.17
USH2AO75445 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 AL022322.2-201ENST00000624072 20397 ntBASIC1.52□□□□□ -2.17
USH2AO75445 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC1.52□□□□□ -2.17
USH2AO75445 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 AC007159.1-201ENST00000566529 4706 ntBASIC1.52□□□□□ -2.17
USH2AO75445 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 RPS24P12-201ENST00000402084 394 ntBASIC1.52□□□□□ -2.17
USH2AO75445 HLFP1-201ENST00000402375 499 ntBASIC1.52□□□□□ -2.17
USH2AO75445 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 BX119904.1-201ENST00000432026 348 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC1.52□□□□□ -2.17
USH2AO75445 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms