Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Y_RNA.169-201ENST00000363745 96 ntBASIC4.08□□□□□ -1.76
PRKNO60260 SNORA62-201ENST00000365493 153 ntBASIC4.08□□□□□ -1.76
PRKNO60260 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.08□□□□□ -1.76
PRKNO60260 NCSTNP1-201ENST00000406229 144 ntBASIC4.08□□□□□ -1.76
PRKNO60260 RNU6-575P-201ENST00000411326 105 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKNO60260 COX6CP17-201ENST00000421389 185 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKNO60260 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 RPS3AP54-201ENST00000435535 734 ntBASIC4.08□□□□□ -1.76
PRKNO60260 TMX2P1-201ENST00000436507 708 ntBASIC4.08□□□□□ -1.76
PRKNO60260 RPL23AP52-201ENST00000439311 478 ntBASIC4.08□□□□□ -1.76
PRKNO60260 UBE2V1P5-201ENST00000440070 405 ntBASIC4.08□□□□□ -1.76
PRKNO60260 EXTL2P1-201ENST00000446218 416 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC243772.1-201ENST00000451620 410 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 RNA5SP103-201ENST00000459503 118 ntBASIC4.08□□□□□ -1.76
PRKNO60260 RPL7P22-201ENST00000466005 733 ntBASIC4.08□□□□□ -1.76
PRKNO60260 MTND2P14-201ENST00000482139 351 ntBASIC4.08□□□□□ -1.76
PRKNO60260 RN7SL810P-201ENST00000493031 276 ntBASIC4.08□□□□□ -1.76
PRKNO60260 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.08□□□□□ -1.76
PRKNO60260 RNA5SP497-201ENST00000516081 97 ntBASIC4.08□□□□□ -1.76
PRKNO60260 RNU5A-4P-201ENST00000516588 111 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AC010306.1-201ENST00000523223 1117 ntBASIC4.08□□□□□ -1.76
PRKNO60260 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKNO60260 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 OR5BC1P-201ENST00000529327 739 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 AC091515.1-201ENST00000548110 679 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.08□□□□□ -1.76
PRKNO60260 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AC008088.1-201ENST00000580993 280 ntBASIC4.08□□□□□ -1.76
PRKNO60260 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKNO60260 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.08□□□□□ -1.76
PRKNO60260 VN1R88P-201ENST00000596787 292 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC013444.2-201ENST00000603317 787 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC010201.1-201ENST00000605051 540 ntBASIC4.08□□□□□ -1.76
PRKNO60260 Z98200.1-201ENST00000607298 470 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AP005137.2-201ENST00000609238 400 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC005962.2-201ENST00000611427 652 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AL353726.1-201ENST00000614041 1000 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC114781.5-201ENST00000615297 108 ntBASIC4.08□□□□□ -1.76
PRKNO60260 AC092608.3-201ENST00000625017 386 ntBASIC4.08□□□□□ -1.76
PRKNO60260 ATE1-AS1-202ENST00000636460 506 ntBASIC4.08□□□□□ -1.76
PRKNO60260 MFSD8-245ENST00000641743 948 ntBASIC4.08□□□□□ -1.76
PRKNO60260 OR52H1-202ENST00000641796 1061 ntBASIC4.08□□□□□ -1.76
PRKNO60260 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRKNO60260 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.08□□□□□ -1.76
PRKNO60260 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKNO60260 AC139713.2-215ENST00000641428 5037 ntBASIC4.07□□□□□ -1.76
PRKNO60260 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 AC104118.1-201ENST00000607625 1589 ntBASIC4.07□□□□□ -1.76
PRKNO60260 OR51H2P-202ENST00000641424 3046 ntBASIC4.07□□□□□ -1.76
PRKNO60260 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 AC104454.1-201ENST00000421341 1401 ntBASIC4.07□□□□□ -1.76
PRKNO60260 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.07□□□□□ -1.76
PRKNO60260 MTND4P31-201ENST00000425607 1343 ntBASIC4.07□□□□□ -1.76
PRKNO60260 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 RNU6-707P-201ENST00000364647 95 ntBASIC4.07□□□□□ -1.76
PRKNO60260 MIR3065-201ENST00000390137 79 ntBASIC4.07□□□□□ -1.76
PRKNO60260 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 AL590290.1-201ENST00000405336 380 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 AL365338.1-201ENST00000422282 858 ntBASIC4.07□□□□□ -1.76
PRKNO60260 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 RPL34P6-201ENST00000432390 345 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC011998.1-201ENST00000433403 117 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AL031663.1-201ENST00000437445 219 ntBASIC4.07□□□□□ -1.76
PRKNO60260 COX7BP2-201ENST00000437976 242 ntBASIC4.07□□□□□ -1.76
PRKNO60260 CBX1P4-201ENST00000439415 457 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.07□□□□□ -1.76
PRKNO60260 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 BX248409.1-201ENST00000455497 255 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 RPS23P7-201ENST00000466210 444 ntBASIC4.07□□□□□ -1.76
PRKNO60260 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.07□□□□□ -1.76
PRKNO60260 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 RPL23AP12-201ENST00000467573 473 ntBASIC4.07□□□□□ -1.76
PRKNO60260 PRDX3P4-201ENST00000470828 747 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms