Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 SGO1P2-201ENST00000429458 1589 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
FOXN3O00409 MAPK10-349ENST00000641767 3661 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXN3O00409 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 Y_RNA.25-201ENST00000362528 102 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 SUGT1P1-201ENST00000379514 476 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AL109941.1-201ENST00000401925 229 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AL121978.1-201ENST00000402778 359 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AL078604.1-201ENST00000404609 466 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXN3O00409 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 AC005345.1-201ENST00000431868 217 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC008072.1-201ENST00000434254 824 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 LYPLA1P1-201ENST00000434514 622 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 MTND5P2-201ENST00000442927 1142 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 HMGN3P1-201ENST00000453847 193 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 RNU7-125P-201ENST00000458760 62 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXN3O00409 RPL7P16-201ENST00000479738 738 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 SCARNA22-201ENST00000503991 125 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 MTATP6P22-201ENST00000507369 598 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXN3O00409 AC110792.2-201ENST00000510278 224 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 RN7SKP46-201ENST00000515942 234 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 RNU6-1129P-201ENST00000515964 104 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC022882.1-201ENST00000532142 501 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC135279.1-201ENST00000543493 504 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.07□□□□□ -1.6
FOXN3O00409 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 AC079075.1-201ENST00000559543 878 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 MIR4716-201ENST00000579628 84 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXN3O00409 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.07□□□□□ -1.6
FOXN3O00409 AL358072.1-201ENST00000604156 575 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 VIS1.1-201ENST00000610517 203 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC068870.2-201ENST00000620635 389 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 MIR6719-201ENST00000622428 87 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC139792.2-201ENST00000624218 587 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 AC068137.4-201ENST00000638485 296 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
FOXN3O00409 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
FOXN3O00409 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FOXN3O00409 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
FOXN3O00409 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXN3O00409 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN3O00409 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FOXN3O00409 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXN3O00409 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
FOXN3O00409 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXN3O00409 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
FOXN3O00409 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 OR56B2P-201ENST00000317102 954 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXN3O00409 AL645927.1-201ENST00000396783 406 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 RBMY2KP-201ENST00000418221 992 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC004074.1-201ENST00000421810 1063 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC012519.1-201ENST00000424588 610 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AL593851.1-201ENST00000426171 157 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 RPL31P54-201ENST00000429803 370 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms