Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 U6.48-201ENST00000618523 106 ntBASIC4.42□□□□□ -1.7
O00370 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.42□□□□□ -1.7
O00370 AC009269.6-201ENST00000621778 588 ntBASIC4.42□□□□□ -1.7
O00370 AC024023.1-201ENST00000624530 922 ntBASIC4.42□□□□□ -1.7
O00370 MIR6830-201ENST00000636015 70 ntBASIC4.42□□□□□ -1.7
O00370 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
O00370 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.42□□□□□ -1.7
O00370 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
O00370 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.42□□□□□ -1.7
O00370 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
O00370 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
O00370 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.42□□□□□ -1.7
O00370 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.41□□□□□ -1.7
O00370 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.41□□□□□ -1.7
O00370 AC009951.1-201ENST00000623674 2614 ntBASIC4.41□□□□□ -1.7
O00370 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
O00370 SNORA37-201ENST00000384504 129 ntBASIC4.41□□□□□ -1.7
O00370 RPL22P22-201ENST00000395439 379 ntBASIC4.41□□□□□ -1.7
O00370 AP002784.2-201ENST00000397300 549 ntBASIC4.41□□□□□ -1.7
O00370 RN7SKP33-201ENST00000410942 340 ntBASIC4.41□□□□□ -1.7
O00370 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.41□□□□□ -1.7
O00370 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.41□□□□□ -1.7
O00370 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
O00370 MTND2P9-201ENST00000422293 931 ntBASIC4.41□□□□□ -1.7
O00370 COX6CP15-201ENST00000426313 211 ntBASIC4.41□□□□□ -1.7
O00370 DEFB130D-201ENST00000426866 237 ntBASIC4.41□□□□□ -1.7
O00370 HMGB1P16-201ENST00000447155 540 ntBASIC4.41□□□□□ -1.7
O00370 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.41□□□□□ -1.7
O00370 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.41□□□□□ -1.7
O00370 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.41□□□□□ -1.7
O00370 MTATP6P22-201ENST00000507369 598 ntBASIC4.41□□□□□ -1.7
O00370 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.41□□□□□ -1.7
O00370 IGKV2-36-201ENST00000519999 223 ntBASIC4.41□□□□□ -1.7
O00370 OR4A2P-201ENST00000527276 913 ntBASIC4.41□□□□□ -1.7
O00370 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.41□□□□□ -1.7
O00370 AP002812.4-201ENST00000532139 286 ntBASIC4.41□□□□□ -1.7
O00370 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.41□□□□□ -1.7
O00370 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.41□□□□□ -1.7
O00370 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.41□□□□□ -1.7
O00370 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.41□□□□□ -1.7
O00370 AC106734.1-201ENST00000568646 663 ntBASIC4.41□□□□□ -1.7
O00370 AC007599.1-201ENST00000568688 1174 ntBASIC4.41□□□□□ -1.7
O00370 MTND4LP24-201ENST00000572277 291 ntBASIC4.41□□□□□ -1.7
O00370 RN7SL600P-201ENST00000581811 299 ntBASIC4.41□□□□□ -1.7
O00370 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
O00370 HMGB1P50-201ENST00000605814 607 ntBASIC4.41□□□□□ -1.7
O00370 AL391834.2-201ENST00000609982 546 ntBASIC4.41□□□□□ -1.7
O00370 VN1R9P-201ENST00000614184 867 ntBASIC4.41□□□□□ -1.7
O00370 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
O00370 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.41□□□□□ -1.7
O00370 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.41□□□□□ -1.7
O00370 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
O00370 AC100871.1-201ENST00000507871 1456 ntBASIC4.41□□□□□ -1.7
O00370 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
O00370 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
O00370 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
O00370 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
O00370 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
O00370 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.4□□□□□ -1.7
O00370 MTCO1P18-201ENST00000455518 1419 ntBASIC4.4□□□□□ -1.7
O00370 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
O00370 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
O00370 AL355615.1-201ENST00000406187 641 ntBASIC4.4□□□□□ -1.71
O00370 RPL23AP48-201ENST00000406913 488 ntBASIC4.4□□□□□ -1.71
O00370 AP000357.1-201ENST00000409926 1165 ntBASIC4.4□□□□□ -1.71
O00370 VTA1P1-201ENST00000414044 866 ntBASIC4.4□□□□□ -1.71
O00370 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 AC234782.4-201ENST00000417646 1048 ntBASIC4.4□□□□□ -1.71
O00370 MTND2P15-201ENST00000418575 892 ntBASIC4.4□□□□□ -1.71
O00370 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 AC013262.1-201ENST00000426710 252 ntBASIC4.4□□□□□ -1.71
O00370 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.4□□□□□ -1.71
O00370 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.4□□□□□ -1.71
O00370 AL353093.1-201ENST00000441292 436 ntBASIC4.4□□□□□ -1.71
O00370 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.4□□□□□ -1.71
O00370 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.4□□□□□ -1.71
O00370 AC092685.1-201ENST00000447960 1243 ntBASIC4.4□□□□□ -1.71
O00370 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
O00370 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.4□□□□□ -1.71
O00370 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.4□□□□□ -1.71
O00370 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
O00370 AC087894.1-201ENST00000538359 518 ntBASIC4.4□□□□□ -1.71
O00370 AP003717.3-201ENST00000544832 1180 ntBASIC4.4□□□□□ -1.71
O00370 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.4□□□□□ -1.71
O00370 AC025884.1-201ENST00000556034 378 ntBASIC4.4□□□□□ -1.71
O00370 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
O00370 AC126365.2-201ENST00000580630 379 ntBASIC4.4□□□□□ -1.71
O00370 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.4□□□□□ -1.71
O00370 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 AC069304.3-201ENST00000603938 1084 ntBASIC4.4□□□□□ -1.71
O00370 MIR7702-201ENST00000621931 59 ntBASIC4.4□□□□□ -1.71
O00370 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.4□□□□□ -1.71
O00370 AC099654.8-201ENST00000637757 681 ntBASIC4.4□□□□□ -1.71
O00370 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.4□□□□□ -1.71
O00370 MTND4P31-201ENST00000425607 1343 ntBASIC4.4□□□□□ -1.71
O00370 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms